Human Metabolome Database: Showing Protein Ring finger protein 20 (HMDBP09296)

Identification Biological properties Gene properties Protein properties External links References XML Show 4 metabolites

Identification
HMDB Protein ID	HMDBP09296
Secondary Accession Numbers	15126
Name	Ring finger protein 20
Synonyms	Not Available
Gene Name	RNF20
Protein Type	Enzyme
Biological Properties
General Function	Replication, recombination and repair
Specific Function	Not Available
Pathways	Not Available
Reactions	Not Available
GO Classification	Not Available
Cellular Location	Not Available
Gene Properties
Chromosome Location	Not Available
Locus	Not Available
SNPs	A7MCT5
Gene Sequence	>2928 bp ATGTCAGGAATTGGAAATAAAAGAGCAGCTGGAGAACCTGGCACCTCCATGCCTCCTGAG AAGAAGGCAGCTGTTGAAGATTCAGGGACCACAGTGGAAACAATTAAGCTAGGAGGTGTC TCTTCAACGGAGGAACTAGACATTAGAACACTGCAAACCAAAAATCGCAAGCTGGCAGAA ATGTTGGATCAGCGGCAGGCCATTGAAGATGAACTTCGTGAGCACATTGAAAAACTGGAA CGACGACAGGCCACTGATGATGCCTCACTATTGATTGTCAACCGATACTGGAGTCAGTTT GATGAAAACATCCGTATCATCCTTAAACGTTATGATCTGGAGCAGGGCTTGGGAGACCTA CTCACAGAACGAAAAGCCCTTGTTGTGCCTGAACCAGAACCAGACTCTGATAGCAATCAG GAGCGTAAAGATGACCGAGAGAGAGGGGAAGGGCAAGAGCCAGCTTTCTCTTTCCTTGCT ACTTTGGCCAGCAGTTCCAGTGAAGAGATGGAGTCTCAGCTGCAGGAACGTGTGGAGTCT TCCCGCCGAGCCGTGTCCCAGATTGTGACTGTTTATGATAAATTGCAAGAAAAAGTGGAG CTCTTATCCCGGAAGCTAAACAGTGGAGATAATCTGATAGTGGAGGAAGCAGTGCAGGAG CTGAACTCTTTCCTCGCACAGGAGAATATGAGGCTACAGGAATTGACAGATCTTCTTCAG GAAAAGCATCGCACCATGTCTCAGGAGTTCTCCAAGTTGCAGAGTAAAGTGGAGACAGCC GAATCACGAGTGTCTGTCCTGGAGTCCATGATTGATGACCTGCAGTGGGATATTGACAAA ATTCGAAAGAGGGAACAGCGACTCAACCGACACTTAGCAGAAGTCCTAGAACGGGTGAAT TCCAAAGGTTATAAGGTGTATGGAGCGGGGAGCAGTCTGTATGGCGGCACAATCACTATC AATGCTCGGAAGTTTGAGGAAATGAATGCAGAGCTTGAGGAGAACAAAGAGTTGGCTCAG AACCGTCTCTGTGAGCTGGAGAAACTTCGGCAAGACTTTGAGGAGGTCACTACACAAAAT GAAAAGCTGAAGGTGGAATTGCGGAGTGCAGTGGAGCAAGTCGTTAAGGAAACTCCAGAA TATCGCTGCATGCAGTCACAGTTCTCCGTCTTGTATAATGAGAGCCTACAGTTGAAAGCA CACTTGGATGAGGCTCGGACCCTGCTTCATGGCACCAGAGGAACCCACCAGCACCAGGTT GAGCTTATTGAGCGAGATGAGGTTAGTCTTCATAAGAAGCTGAGGACTGAAGTAATTCAG CTAGAAGATACATTGGCCCAGGTCCGCAAGGAGTATGAAATGCTGAGGATAGAATTTGAG CAGACCCTTGCTGCCAATGAACAAGCAGGCCCTATAAACAGGGAGATGCGCCACCTCATC AGTAGCCTCCAGAATCACAATCACCAGCTGAAAGGGGAGGTCCTGAGATATAAGCGGAAA TTGAGAGAAGCCCAGTCTGACCTGAACAAGACACGCCTGCGTAGTGGTAGTGCCCTCCTG CAGTCCCAGTCTAGTACTGAGGACCCGAAGGATGAGCCTGCGGAGCTAAAACCAGATTCT GAGGACTTATCCTCCCAGTCCTCAGCTTCAAAGGCATCTCAGGAGGATGCCAATGAAATC AAGTCTAAACGGGATGAAGAAGAACGAGAACGAGAAAGGAGGGAGAAGGAGAGGGAACGA GAAAGAGAACGGGAGAAGGAGAAGGAGAGAGAACGAGAGAAGCAGAAGCTAAAAGAGTCA GAAAAAGAGAGAGATTCTGCTAAGGATAAAGAGAAAGGCAAACATGATGATGGACGGAAA AAGGAAGCAGAAATTATCAAACAATTGAAGATTGAACTCAAGAAGGCACAGGAGAGCCAA AAGGAGATGAAACTATTGCTGGATATGTACCGTTCTGCCCCAAAGGAACAGAGAGACAAA GTTCAGCTGATGGCAGCTGAGAAGAAGTCTAAGGCAGAGTTGGAAGATCTAAGGCAAAGA CTCAAGGATCTGGAAGATAAAGAGAAGAAAGAGAACAAGAAAATGGCTGATGAGGATGCC TTGAGGAAGATCCGGGCAGTGGAGGAGCAGATAGAATACCTACAGAAGAAGCTAGCCATG GCCAAGCAGGAAGAAGAAGCACTCCTCTCTGAAATGGATGTCACAGGCCAGGCCTTTGAA GACATGCAGGAGCAAAATATCCGTTTGATGCAGCAATTGCGGGAGAAGGATGATGCAAAT TTCAAGCTCATGTCAGAGCGTATCAAGTCCAATCAGATCCATAAGTTGCTTAAAGAAGAG AAGGAGGAGCTGGCAGACCAGGTGTTGACTCTGAAGACTCAGGTTGATGCCCAGCTACAG GTAGTAAGGAAACTGGAAGAGAAGGAGCATCTGTTACAGAGCAACATTGGCACAGGGGAG AAAGAGCTGGGTCTTAGGACCCAAGCCTTAGAGATGAATAAACGCAAGGCAATGGAGGCA GCCCAGCTTGCAGATGACCTCAAAGCACAACTGGAGTTGGCTCAGAAGAAGCTACATGAT TTTCAGGATGAGATCGTGGAGAACAGTGTTACCAAAGAAAAGGACATGTTCAATTTCAAA CGAGCCCAGGAGGACATCTCTAGACTTCGCAGGAAGCTGGAGACCACAAAGAAACCAGAC AATGTACCCAAGTGTGATGAGATTCTGATGGAAGAGATTAAGGATTACAAGGCACGCTTG ACCTGTCCGTGCTGTAACATGCGTAAAAAGGATGCTGTTCTTACTAAGTGTTTTCATGTC TTCTGCTTTGAGTGTGTGAAGACACGCTATGACACCCGCCAGCGCAAATGTCCCAAGTGT AATGCTGCTTTTGGTGCCAATGATTTTCATCGCATCTACATTGGTTGA
Protein Properties
Number of Residues	975
Molecular Weight	113664.0
Theoretical pI	5.7
Pfam Domain Function	Not Available
Signals	None
Transmembrane Regions	None
Protein Sequence	>Ring finger protein 20 MSGIGNKRAAGEPGTSMPPEKKAAVEDSGTTVETIKLGGVSSTEELDIRTLQTKNRKLAE MLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLEQGLGDL LTERKALVVPEPEPDSDSNQERKDDRERGEGQEPAFSFLATLASSSSEEMESQLQERVES SRRAVSQIVTVYDKLQEKVELLSRKLNSGDNLIVEEAVQELNSFLAQENMRLQELTDLLQ EKHRTMSQEFSKLQSKVETAESRVSVLESMIDDLQWDIDKIRKREQRLNRHLAEVLERVN SKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRLCELEKLRQDFEEVTTQN EKLKVELRSAVEQVVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRGTHQHQV ELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI SSLQNHNHQLKGEVLRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDPKDEPAELKPDS EDLSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKES EKERDSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDK VQLMAAEKKSKAELEDLRQRLKDLEDKEKKENKKMADEDALRKIRAVEEQIEYLQKKLAM AKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEE KEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRKAMEA AQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMFNFKRAQEDISRLRRKLETTKKPD NVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKC NAAFGANDFHRIYIG
External Links
GenBank ID Protein	156229689
UniProtKB/Swiss-Prot ID	Q5VTR2
UniProtKB/Swiss-Prot Entry Name	A7MCT5_HUMAN
PDB IDs	Not Available
GenBank Gene ID	BC152309
GeneCard ID	A7MCT5
GenAtlas ID	Not Available
HGNC ID	Not Available
References
General References	Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA: Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11. [PubMed:12477932 ]