Hmdb loader
Identification
HMDB Protein ID HMDBP08572
Secondary Accession Numbers
  • 14286
Name RUN domain-containing protein 3A
Synonyms
  1. RPIP-8
  2. Rap2-interacting protein 8
Gene Name RUNDC3A
Protein Type Unknown
Biological Properties
General Function Involved in small GTPase regulator activity
Specific Function May act as an effector of RAP2A in neuronal cells
Pathways Not Available
Reactions Not Available
GO Classification Not Available
Cellular Location Not Available
Gene Properties
Chromosome Location Chromosome:1
Locus 17q21.31
SNPs RUNDC3A
Gene Sequence
>1341 bp
ATGGAAGCGAGCTTTGTCCAGACCACCATGGCTCTGGGGCTGTCCTCCAAGAAAGCGTCC
TCTCGCAACGTGGCTGTGGAGCGTAAGAACCTGATCACCGTGTGCAGGTTCTCTGTGAAA
ACGCTGCTGGAGAAGTACACAGCGGAGCCCATCGATGACTCATCGGAGGAGTTTGTCAAT
TTTGCAGCCATTTTAGAGCAGATCCTCAGCCACCGCTTCAAAGCCTGTGCCCCAGCAGGT
CCAGTGAGCTGGTTCAGCTCAGACGGGCAGCGGGGCTTTTGGGACTATATCCGGCTGGCC
TGCAGCAAAGTGCCCAACAACTGTGTGAGCAGCATCGAGAACATGGAGAACATCAGCACA
GCCCGGGCCAAGGGCCGGGCATGGATCCGGGTGGCACTGATGGAGAAGCGCATGTCAGAA
TACATCACCACGGCTCTGCGTGACACCCGGACCACCAGACGGTTCTATGACTCTGGAGCC
ATCATGCTGCGGGATGAAGCCACCATCCTCACCGGAATGCTGATCGGACTGAGCGCCATC
GACTTCAGCTTCTGTCTAAAGGGGGAAGTCCTGGACGGGAAGACCCCCGTGGTCATCGAT
TACACGCCCTACCTAAAGTTCACGCAGAGCTACGACTACCTGACGGACGAGGAGGAGCGG
CACAGCGCCGAGAGCAGCACGAGCGAGGACAACTCGCCCGAGCACCCGTACCTCCCGCTC
GTCACCGATGAGGACAGCTGGTACAGCAAGTGGCACAAGATGGAGCAGAAGTTCCGCATC
GTCTACGCGCAGAAGGGCTACCTGGAGGAGCTGGTGCGTCTGCGCGAGTCGCAGCTGAAG
GACCTGGAGGCGGAGAACCGGCGGCTTCAGCTGCAGCTGGAGGAGGCGGCGGCGCAGAAC
CAGCGCGAGAAACGGGAGCTGGAAGGCGTGATCCTGGAGCTGCAGGAGCAGCTGACAGGT
CTGATCCCCAGTGACCACGCCCCTCTGGCCCAGGGTTCCAAGGAGCTCACTACACCCCTG
GTCAATCAATGGCCCTCACTGGGAACGCTTAATGGGGCCGAGGGCGCCAGCAACTCCAAG
CTCTACCGGAGACACAGCTTCATGAGCACGGAGCCGCTGTCAGCTGAAGCCAGTCTGAGC
TCGGACTCCCAGCGCCTGGGAGAGGGCACGCGGGACGAGGAGCCCTGGGGTCCCATCGGG
AAGGACCCCACGCCCTCCATGCTGGGCCTCTGCGGCTCCCTGGCCTCCATTCCCAGCTGC
AAGTCCCTGGCGAGCTTCAAATCCAACGAGTGCCTGGTGAGCGACAGTCCCGAGGGCAGC
CCAGCACTGAGCCCCAGCTGA
Protein Properties
Number of Residues 446
Molecular Weight 49746.5
Theoretical pI 4.94
Pfam Domain Function
Signals
  • None
Transmembrane Regions
  • None
Protein Sequence
>RUN domain-containing protein 3A
MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVN
FAAILEQILSHRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENIST
ARAKGRAWIRVALMEKRMSEYITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAI
DFSFCLKGEVLDGKTPVVIDYTPYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPL
VTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQN
QREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTLNGAEGASNSK
LYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGKDPTPSMLGLCGSLASIPSC
KSLASFKSNECLVSDSPEGSPALSPS
GenBank ID Protein 221307578
UniProtKB/Swiss-Prot ID Q59EK9
UniProtKB/Swiss-Prot Entry Name RUN3A_HUMAN
PDB IDs Not Available
GenBank Gene ID NM_001144825.1
GeneCard ID RUNDC3A
GenAtlas ID RUNDC3A
HGNC ID HGNC:16984
References
General References
  1. Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, Irie R, Wakamatsu A, Hayashi K, Sato H, Nagai K, Kimura K, Makita H, Sekine M, Obayashi M, Nishi T, Shibahara T, Tanaka T, Ishii S, Yamamoto J, Saito K, Kawai Y, Isono Y, Nakamura Y, Nagahari K, Murakami K, Yasuda T, Iwayanagi T, Wagatsuma M, Shiratori A, Sudo H, Hosoiri T, Kaku Y, Kodaira H, Kondo H, Sugawara M, Takahashi M, Kanda K, Yokoi T, Furuya T, Kikkawa E, Omura Y, Abe K, Kamihara K, Katsuta N, Sato K, Tanikawa M, Yamazaki M, Ninomiya K, Ishibashi T, Yamashita H, Murakawa K, Fujimori K, Tanai H, Kimata M, Watanabe M, Hiraoka S, Chiba Y, Ishida S, Ono Y, Takiguchi S, Watanabe S, Yosida M, Hotuta T, Kusano J, Kanehori K, Takahashi-Fujii A, Hara H, Tanase TO, Nomura Y, Togiya S, Komai F, Hara R, Takeuchi K, Arita M, Imose N, Musashino K, Yuuki H, Oshima A, Sasaki N, Aotsuka S, Yoshikawa Y, Matsunawa H, Ichihara T, Shiohata N, Sano S, Moriya S, Momiyama H, Satoh N, Takami S, Terashima Y, Suzuki O, Nakagawa S, Senoh A, Mizoguchi H, Goto Y, Shimizu F, Wakebe H, Hishigaki H, Watanabe T, Sugiyama A, Takemoto M, Kawakami B, Yamazaki M, Watanabe K, Kumagai A, Itakura S, Fukuzumi Y, Fujimori Y, Komiyama M, Tashiro H, Tanigami A, Fujiwara T, Ono T, Yamada K, Fujii Y, Ozaki K, Hirao M, Ohmori Y, Kawabata A, Hikiji T, Kobatake N, Inagaki H, Ikema Y, Okamoto S, Okitani R, Kawakami T, Noguchi S, Itoh T, Shigeta K, Senba T, Matsumura K, Nakajima Y, Mizuno T, Morinaga M, Sasaki M, Togashi T, Oyama M, Hata H, Watanabe M, Komatsu T, Mizushima-Sugano J, Satoh T, Shirai Y, Takahashi Y, Nakagawa K, Okumura K, Nagase T, Nomura N, Kikuchi H, Masuho Y, Yamashita R, Nakai K, Yada T, Nakamura Y, Ohara O, Isogai T, Sugano S: Complete sequencing and characterization of 21,243 full-length human cDNAs. Nat Genet. 2004 Jan;36(1):40-5. Epub 2003 Dec 21. [PubMed:14702039 ]
  2. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
  3. Bechtel S, Rosenfelder H, Duda A, Schmidt CP, Ernst U, Wellenreuther R, Mehrle A, Schuster C, Bahr A, Blocker H, Heubner D, Hoerlein A, Michel G, Wedler H, Kohrer K, Ottenwalder B, Poustka A, Wiemann S, Schupp I: The full-ORF clone resource of the German cDNA Consortium. BMC Genomics. 2007 Oct 31;8:399. [PubMed:17974005 ]
  4. Janoueix-Lerosey I, Pasheva E, de Tand MF, Tavitian A, de Gunzburg J: Identification of a specific effector of the small GTP-binding protein Rap2. Eur J Biochem. 1998 Mar 1;252(2):290-8. [PubMed:9523700 ]