Hmdb loader
Identification
HMDB Protein ID HMDBP08017
Secondary Accession Numbers
  • 13728
Name Striatin-4
Synonyms
  1. Zinedin
Gene Name STRN4
Protein Type Unknown
Biological Properties
General Function Involved in armadillo repeat domain binding
Specific Function Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein
Pathways Not Available
Reactions Not Available
GO Classification Not Available
Cellular Location
  1. Cytoplasm
  2. Peripheral membrane protein
  3. Membrane
Gene Properties
Chromosome Location Chromosome:1
Locus 19q13.2
SNPs STRN4
Gene Sequence
>2262 bp
ATGATGGAGGAGCGAGCGGCCGCCGCGGTCGCCGCCGCCGCCTCCTCCTGCCGTCCGCTC
GGCTCAGGCGCGGGCCCTGGCCCCACTGGGGCGGCCCCGGTCTCCGCCCCTGCCCCCGGG
CCGGGCCCGGCAGGTAAGGGAGGCGGCGGCGGAGGCAGCCCCGGGCCCACGGCGGGCCCG
GAGCCCCTGAGCCTGCCGGGGATCCTGCACTTTATCCAGCACGAGTGGGCGCGCTTCGAA
GCCGAGAAAGCCCGCTGGGAGGCCGAGCGCGCCGAGTTACAGGCTCAGGTGGCCTTCCTT
CAGGGAGAGAGGAAAGGGCAGGAGAATCTAAAGACGGACCTGGTGCGGCGGATCAAGATG
CTAGAGTATGCGCTGAAGCAGGAAAGGGCCAAATATCATAAACTGAAGTTTGGGACAGAC
CTGAACCAGGGGGAGAAGAAAGCAGATGTGTCAGAACAAGTCTCCAATGGCCCCGTGGAA
TCGGTCACCCTGGAGAACAGCCCGTTGGTGTGGAAGGAGGGGCGGCAGCTTCTCCGACAG
TACCTGGAAGAGGTGGGCTACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGT
TCCCTGCTGGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGCCGAGTGAAGGGGCCCCC
AGGGCTCCACCAGGCCCTGCAGGGCTCAGTGGTGGGGAGTCGCTGCTGGTGAAACAGATC
GAGGAGCAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCA
GTGCTGGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGAAGACAGCGACGAGGACGAT
GAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTGTGAAGCTCCCATCCAAGGCTCTGGTG
CCCGAAATGGAAGACGAGGATGAGGAAGACGACTCTGAGGATGCTATCAATGAGTTTGAT
TTCCTGGGCTCAGGAGAGGATGGGGAAGGGGCTCCAGACCCTCGGCGGTGCACTGTGGAT
GGGAGCCCCCATGAGCTGGAAAGCCGTCGGGTCAAACTCCAAGGCGTTCTGGCTGACCTG
CGGGATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCGCCTCCTGGCACACCCCAGCCC
CGGCCACATGAAGACGTCTTCATCATGGACACTATCGGGGGCGGGGAGGTGAGCCTGGGG
GACTTGGCAGATCTCACCGTCACCAACGACAACGACCTCAGCTGCGATCTGTCTGACAGC
AAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTCGCACTACGACGGC
ATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACGGC
ACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCTAGAT
GTGGAACCTATACATGCTTTCCGGGCTCACAGGGGCCCAGTGTTGGCTGTGGCTATGGGC
AGCAACAGTGAATACTGCTACAGTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGATT
CCAGACCTCAGCATGGATCCCTATGATGGCTACGACCCAAGCGTGCTGAGCCACGTCCTG
GAGGGCCACGGGGACGCCGTGTGGGGCCTGGCCTTCAGTCCCACCTCCCAGCGCCTGGCC
TCCTGTTCTGCTGATGGCACCGTCCGCATCTGGGACCCCAGCAGCAGCAGCCCGGCCTGC
CTCTGCACCTTCCCCACAGCCAGCGAGCACGGGGTCCCCACCTCAGTGGCCTTCACCAGC
ACCGAGCCTGCCCACATCGTGGCCTCCTTCCGCTCTGGCGACACCGTCTTGTATGACATG
GAGGTTGGCAGTGCCCTCCTCACGCTGGAGTCCCGGGGCAGCAGCGGTCCAACCCAGATC
AACCAAGTGGTGAGTCATCCAAACCAGCCTCTCACCATCACCGCCCACGACGACAGGGGC
ATCCGCTTCCTGGACAATCGGACAGGTAAGCCGGTGCACTCCATGGTTGCACACCTGGAC
GCAGTCACCTGCCTAGCCGTGGACCCCAACGGCGCATTCCTGATGTCAGGAAGCCATGAC
TGCTCCCTGCGTCTCTGGAGCCTGGACAACAAAACGTGCGTGCAGGAGATCACGGCCCAC
CGCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCACCCCAGCAAGGCCCTCATT
GCCAGTGCTGGCGCTGATGCCCTGGCCAAGGTCTTCGTATGA
Protein Properties
Number of Residues 753
Molecular Weight 80595.3
Theoretical pI 5.06
Pfam Domain Function
Signals
  • None
Transmembrane Regions
  • None
Protein Sequence
>Striatin-4
MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGP
EPLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKM
LEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQ
YLEEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEGAPRAPPGPAGLSGGESLLVKQI
EEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALV
PEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDPRRCTVDGSPHELESRRVKLQGILADL
RDVDGLPPKVTGPPPGTPQPRPHEDVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLSDS
KDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALD
VEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVL
EGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTS
TEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDDRG
IRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAH
RKKHEEAIHAVACHPSKALIASAGADALAKVFV
GenBank ID Protein 6851362
UniProtKB/Swiss-Prot ID Q9NRL3
UniProtKB/Swiss-Prot Entry Name STRN4_HUMAN
PDB IDs Not Available
GenBank Gene ID AF212940
GeneCard ID STRN4
GenAtlas ID STRN4
HGNC ID HGNC:15721
References
General References
  1. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
  2. Dephoure N, Zhou C, Villen J, Beausoleil SA, Bakalarski CE, Elledge SJ, Gygi SP: A quantitative atlas of mitotic phosphorylation. Proc Natl Acad Sci U S A. 2008 Aug 5;105(31):10762-7. doi: 10.1073/pnas.0805139105. Epub 2008 Jul 31. [PubMed:18669648 ]
  3. Mayya V, Lundgren DH, Hwang SI, Rezaul K, Wu L, Eng JK, Rodionov V, Han DK: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions. Sci Signal. 2009 Aug 18;2(84):ra46. doi: 10.1126/scisignal.2000007. [PubMed:19690332 ]
  4. Gauci S, Helbig AO, Slijper M, Krijgsveld J, Heck AJ, Mohammed S: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach. Anal Chem. 2009 Jun 1;81(11):4493-501. doi: 10.1021/ac9004309. [PubMed:19413330 ]
  5. Castets F, Rakitina T, Gaillard S, Moqrich A, Mattei MG, Monneron A: Zinedin, SG2NA, and striatin are calmodulin-binding, WD repeat proteins principally expressed in the brain. J Biol Chem. 2000 Jun 30;275(26):19970-7. [PubMed:10748158 ]