Showing Protein Protocadherin gamma-A11 (HMDBP07920)
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| HMDB Protein ID | HMDBP07920 | |||||||||||||||
| Secondary Accession Numbers |
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| Name | Protocadherin gamma-A11 | |||||||||||||||
| Synonyms |
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| Gene Name | PCDHGA11 | |||||||||||||||
| Protein Type | Unknown | |||||||||||||||
| Biological Properties | ||||||||||||||||
| General Function | Involved in calcium ion binding | |||||||||||||||
| Specific Function | Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain | |||||||||||||||
| Pathways | Not Available | |||||||||||||||
| Reactions | Not Available | |||||||||||||||
| GO Classification |
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| Cellular Location |
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| Gene Properties | ||||||||||||||||
| Chromosome Location | Chromosome:5 | |||||||||||||||
| Locus | 5q31 | |||||||||||||||
| SNPs | PCDHGA11 | |||||||||||||||
| Gene Sequence |
>2808 bp ATGGCGAATCGGCTACAGCGCGGGGACCGCAGTCGGCTGCTGCTGCTGCTGTGCATTTTC CTGGGGACGCTGCGGGGGTTCCGGGCCAGGCAGATCCGATATTCGGTGCCAGAAGAGACC GAAAAGGGCTCCTTCGTGGGCAATATCTCCAAGGACCTGGGGCTGGAGCCCCGGGAGCTG GCGAAGCGCGGAGTCCGCATCGTCTCCAGAGGGAAGACACAGCTTTTCGCTGTGAATCCG CGAAGCGGCAGCTTGATCACGGCAGGCAGGATAGACCGGGAGGAGCTCTGTGAGACGGTG TCCTCCTGTTTTTTAAATATGGAACTTCTCGTGGAAGACACCTTGAAGATTTACGGAGTG GAGGTGGAAATAATAGATATTAATGATAACGCCCCCAGCTTCCAGGAGGACGAAGTGGAG ATAAAAGTCAGTGAGCACGCAATTCCTGGGGCGCGATTTGCTCTTCCTAATGCTAGGGAT CCAGATGTGGGCGTGAACTCCCTCCAGAGCTACCAGCTCAGCCCTAATAATTACTTTTCC TTGCAACTGCGGGGCAGAACGGATGGGGCCAAGAATCCAGAGCTAGTACTGGAGGGAAGC CTGGACCGAGAGAAAGAGGCTGCTCACCTGCTCCTCCTCACAGCTTTAGATGGAGGCGAT CCCATCCGAAAGGGCGCAGTTCCCATTCGTGTGGTGGTCCTCGATGTAAATGATCACATC CCAATGTTTACACAGTCCGTATATCGCGTGAGTGTTCCAGAAAACATCAGCTCCGGAACT CGGGTGCTGATGGTTAATGCAACGGATCCAGACGAGGGAATCAACGGGGAAGTAATGTAT TCATTTCGGAACATGGAAAGCAAGGCTTCTGAAATATTCCAATTGGATTCACAAACTGGA GAAGTTCAAGTACGGGGGTCTCTGGATTTTGAAAAATATAGATTCTATGAGATGGAAATT CAAGGCCAAGATGGTGGAGGTCTCTTTACCACCACGACGATGTTGATCACTGTTGTGGAT GTGAATGATAACGCTCCAGAAATAACTATCACCTCTTCTATTAATTCAATTCTGGAAAAC TCTCCTCCAGGTACAGTGATTGCTCTTCTAAATGTGCAAGATCAAGATTCTGGAGAAAAT GGTCAAGTCTCCTGTTTTATTCCTAACCACCTGCCTTTTAAATTAGAAAAGACTTATGGA AATTATTACAAATTGATAACAAGCAGAGTGCTGGACAGGGAGTTGGTCCAGAGCTACAAT ATAACGTTGACAGCCACAGACCAGGGAAGCCCGCCTTTGTCTGCAGAAACTCATGTCTGG CTGAATGTGGCAGATGACAACGATAACCCTCCCGTTTTTCCTCACTCCTCTTACTCTGCC TACATTCCCGAAAACAACCCCAGGGGTGCCTCCATCTTCTCAGTGACCGCCCTCGACCCG GACAGCAAACAGAATGCCCTGGTCACTTACTCTCTGACGGATGACACTGTCCAGGGGGTG CCTCTGTCCTCCTATGTCTCTATTAACTCCAACACTGGTGTTCTCTATGCCCTACAATCC TTCGACTATGAGCAGTTTCGAGACTTAGAACTGAGAGTGATAGCACGTGACAGCGGGGAC CCGCCCCTCAGCAGCAACGTGTCGCTGAGCCTGTTCGTGCTGGACCAGAACGACAATGCG CCCGAGATCCTGTACCCTGCCCTCCCCACAGACGGCTCCACTGGCGTGGAGCTGGCGCCC CGCTCTGCGGAACCTGGCTACCTGGTGACCAAGGTGGTTGCGGTGGACAAAGATTCAGGC CAGAACGCCTGGCTGTCCTATCGCCTGCTTAAGGCCAGCGAGCCGGGACTCTTCGCGGTG GGGGAGCACACGGGCGAGGTGCGTACAGCGCGGGCACTGCTGGACAGAGACGCGCTCAAG CAGAGCCTCGTGGTGGCCGTCCAGGACCACGGCCAGCCCCCTCTCTCGGCCACCGTCACG CTCACCGTGGCTGTGGCCGACAGCATCCCCGAAGTCCTGGCGGACCTCGGCAGCCTCGAG TCTCTGGCTAACTCTGAAACCTCAGACCTCTCGCTGTACTTGGTGGTGGCGGTGGCCGCA GTCTCCTGCATCTTCCTGGTCTTTGTCATCGTGCTGCTGGCACTCAGGCTGTGGCGCTGG CATAAGTCACGCCTGCTGCAGGCTTCTGAAGGCGGGTTGGCAGGTATGCCCACGTCACAT TTTGTAGGCGTGGACGGGGTACAGGCTTTCCTGCAAACCTATTCCCACGAGGTCTCTCTC ATTGCGGACTCGCAGAAGAGTCACCTGATTTTCCCCCAGCCCAACTATGGGGACACGCTC ATCAGCCAGGAGAGCTGTGAGAAAAGCGAGCCACTCTTGATAGCTGAAGACTCAGCTATC ATTTTAGGCAAATGTGACCCGACAAGTAATCAGCAAGCCCCGCCCAACACGGACTGGCGT TTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACC TGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGT GAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCC CGCTACGGACCCCAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATC CCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCA GGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA |
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| Protein Properties | ||||||||||||||||
| Number of Residues | 935 | |||||||||||||||
| Molecular Weight | 101542.0 | |||||||||||||||
| Theoretical pI | 4.56 | |||||||||||||||
| Pfam Domain Function | ||||||||||||||||
| Signals |
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| Transmembrane Regions |
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| Protein Sequence |
>Protocadherin gamma-A11 MANRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPREL AKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGV EVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFS LQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHI PMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTG EVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILEN SPPGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYN ITLTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDP DSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGD PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG QNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT LTVAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRW HKSRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTL ISQESCEKSEPLLIAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGT WPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYI PGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK |
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| External Links | ||||||||||||||||
| GenBank ID Protein | 5456928 | |||||||||||||||
| UniProtKB/Swiss-Prot ID | Q9Y5H2 | |||||||||||||||
| UniProtKB/Swiss-Prot Entry Name | PCDGB_HUMAN | |||||||||||||||
| PDB IDs | Not Available | |||||||||||||||
| GenBank Gene ID | AF152320 | |||||||||||||||
| GeneCard ID | PCDHGA11 | |||||||||||||||
| GenAtlas ID | PCDHGA11 | |||||||||||||||
| HGNC ID | HGNC:8698 | |||||||||||||||
| References | ||||||||||||||||
| General References |
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