Showing Protein Protocadherin gamma-A6 (HMDBP07915)

• 13626

1. PCDH-gamma-A6

1. Cell membrane
2. Single-pass type I membrane protein

>2799 bp
ATGGCGCCTCCGCAGAGGCATCCGCAGCGCAGCGAGCAGGTCCTGCTCCTCACGCTCCTG
GGGACGCTGTGGGGGGCCGCGGCAGCGCAGATCCGCTACTCTATTCCCGAGGAGCTGGAG
AAAGGCTCCTTCGTAGGCAACATCGTCAAGGATCTGGGACTGGAGCCCCAGGAGTTGGCG
GAGCACGGAGTCCGCATCGTCTCCAGAGGTAGGATGCAGCTTTTCTCTCTGAATCCGCGA
AACGGCAGCTTGGTCACCGCGGGTAGGATAGACCGCGAGGAGCTCTGTGCTCAGAGCCCG
CGGTGTCTGGTGAGTTTTAACATCCTTGTCGAGGATAAACTGAATCTTTATCCCGTGGAA
GTGGAAATAGTGGACATTAATGACAATACACCCCGATTCTTAAAGGAAGAATTGGAAGTG
AAAATTCTCGAAAACGCAGCTCCATCCTCTCGTTTTCCACTAATGGAGGTCTATGACCCT
GATGTGGGAATGAACTCCCTTCAGGGATTTAAGCTCAGTGGTAATAGTCACTTCTCAGTG
GACGTGCAAAGCGAAGCCCATGGGCCCAAGTACCCGGAGCTGGTGCTGGAGGGCACACTG
GACCGGGAAGGAGAAGCCGTTTACCGCCTGGTCCTTACTGCCATGGATGGCGGCGACCCT
GTCCGCTCAAGCGTCGCCCAAATTCTGGTAACAGTTCTAGATGTGAATGACAACACTCCA
ATGTTTACTCAGCCTGTCTACCGTGTAAGTGTTCCTGAAAACCTGCCAGTAGGCACACCA
GTGTTGGCAGTGACTGCCACCGACCAGGATGAAGGAGTCCACGGGGAAGTAACTTATTCC
TTTGTGAAGATTACAGAAAAGATCTCACAAATTTTCTGTTTGAATGTTTTGACTGGAGAA
ATTTCAACTTCTGCAAATCTAGACTATGAGGACTCGAGTTTTTATGAGCTGGGTGTTGAA
GCCCGGGATGGGCCAGGTCTTCGAGACAGAGCGAAAGTCTTAATAACTATCTTGGATGTC
AATGATAATGTACCAGAAGTGGTTGTTACATCTGGAAGCAGAACAATTGCTGAAAGTGCA
CCTCCAGGAACAGTAATCGCCCTTTTTCAAGTGTTCGATCGAGACTCTGGCCTGAATGGC
CTGGTAACCTGTTCCATCCCGAGAAGTCTCCCATTTGAATTGGAAAAATCAGTTGGCAAT
TATTATCGATTAGTGACAAATGCAGCTCTAGACCGGGAAGAGGTATTCTTGTACAACATC
ACTGTGACAGCCACGGACAAAGGAACACCACCTCTGTCTACAGAAACAATCATCTCTCTA
AATGTGGCAGACACCAACGACAACCCGCCCACCTTCCCCCATTCATCCTACTCAGTCTAT
GTCCTTGAAAACAACCCCAGGGGTGCCTCCATCTTCTCTGTGAATGCACTGGACCCTGAC
GTGGACCAGAACGCCCAAGTCTCCTACTCACTGGCAGAAGACACCCTCCAGGGGGCGCCC
CTGTCCTCCTACGTGTCCATCAACTCCGACACTGGGATTCTGTACGCCCTGCGCTCCTTC
GACTATGAGCAGTTGAGAGACCTACAGCTGTGGGTGACAGCCAGCGACAGCGGGGACCCG
CCTCTTAGCAGCAACGTGTCACTGAGCCTGTTTGTGCTGGACCAGAATGACAATGCGCCC
GAGATCCTGTACCCCGCCCTCCCCACAGACGGTTCCACTGGCGTGGAGCTGGCGCCCCGC
TCCGCAGAGCCCGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACAGAGACTCGGGCCAG
AACGCCTGGCTGTCCTACCGCCTGCTCAAGGCCAGCGAGCCAGGACTTTTCTCAGTGGGC
CTGCACACGGGCGAGGTGCGCACGGCGCGCGCCCTGCTGGACAGAGACGCGCTCAAGCAG
AGCCTAGTGGTGGCCGTCCAGGACCACGGCCAGCCCCCTCTCTCCGCCACTGTCACGCTC
ACCGTGGCCGTGGCCGACAGGATCCCCGACATCCTGGCCGACCTGGGCAGCCTCGAGCCC
TCCGCCAAACCCAACGATTCGGACCTCACTCTGTACCTGGTGGTGGCGGTGGCCGCGGTC
TCCTGCGTCTTCCTGGCCTTCGTCATCGTGCTGCTGGCGCTCAGACTGCAGCGCTGGCAC
AAGTCACGCCTGCTGCAGGCTTCGGGAGGTGGCTTAGCGAGCATGCCCGGCTCGCACTTT
GTGGGCGTGGAAGGGGTTCGGGCTTTCCTGCAGACCTATTCCCACGAGGTCTCACTCACT
GCAGACTCGCGTAAGAGTCATCTGATTTTCCCCCAGCCCAACTATGCCGACACGCTTATC
AACCAGGAGAGCTATGAGAAAAGCGAGCCTCTTCTGATAACTCAGGATTTACTTGAAACG
AAAGGAGAACCCAGGCAACTTCAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAG
GCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAAC
AACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCT
GATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGA
CCCCAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGC
AATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAAT
GGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA

• Cadherin (PF00028 )
• Cadherin_2 (PF08266 )

• 1-29

• 693-713

>Protocadherin gamma-A6
MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA
EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE
VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV
DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP
MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE
ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA
PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI
TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD
VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP
PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH
KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK

1. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
2. Wu Q, Maniatis T: A striking organization of a large family of human neural cadherin-like cell adhesion genes. Cell. 1999 Jun 11;97(6):779-90. [PubMed:10380929 ]