Showing Protein Protocadherin beta-5 (HMDBP07895)
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| HMDB Protein ID | HMDBP07895 | |||||||||||||||
| Secondary Accession Numbers |
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| Name | Protocadherin beta-5 | |||||||||||||||
| Synonyms |
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| Gene Name | PCDHB5 | |||||||||||||||
| Protein Type | Unknown | |||||||||||||||
| Biological Properties | ||||||||||||||||
| General Function | Involved in calcium ion binding | |||||||||||||||
| Specific Function | Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain | |||||||||||||||
| Pathways | Not Available | |||||||||||||||
| Reactions | Not Available | |||||||||||||||
| GO Classification |
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| Cellular Location |
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| Gene Properties | ||||||||||||||||
| Chromosome Location | Chromosome:5 | |||||||||||||||
| Locus | 5q31 | |||||||||||||||
| SNPs | PCDHB5 | |||||||||||||||
| Gene Sequence |
>2388 bp ATGGAGACTGCGCTAGCAAAAACGCCACAGAAAAGGCAAGTTATGTTTCTTGCTATATTG TTGCTTTTGTGGGAGGCTGGCTCTGAGGCAGTTAGGTATTCCATACCAGAAGAAACAGAA AGTGGCTATTCTGTGGCCAACCTGGCAAAAGACCTGGGTCTTGGGGTGGGGGAACTGGCC ACTCGGGGCGCGCGAATGCATTACAAAGGAAACAAAGAGCTCTTGCAGCTTGATATAAAG ACCGGCAATTTGCTTCTATATGAAAAACTAGACCGGGAGGTGATGTGCGGGGCGACAGAA CCCTGTATATTGCATTTCCAGCTCTTACTAGAAAATCCAGTGCAGTTTTTTCAAACTGAT CTGCAGCTCACAGATATAAATGACCATGCCCCAGAGTTCCCAGAGAAGGAAATGCTCCTA AAAATCCCAGAGAGCACCCAGCCAGGGACTGTGTTTCCCTTAAAAATAGCCCAGGACTTT GACATAGGTAGCAACACTGTTCAGAACTACACAATCAGCCCAAATTCACACTTTCATGTT GCTACGCATAATCGCGGAGATGGCAGAAAATACCCAGAGCTGGTGCTGGACAAAGCGCTG GACCGGGAGGAGCGGCCTGAGCTCAGCTTAACACTCACTGCACTGGACGGTGGGGCTCCG CCCAGGTCCGGGACCACCACAATTCGCATTGTCGTCTTGGATAATAATGACAACGCCCCC GAATTTTTACAATCATTCTATGAGGTACAGGTGCCCGAGAACAGCCCCCTTAACTCCTTA GTTGTCGTTGTCTCCGCTCGAGATTTAGATGCAGGAGCATATGGGAGTGTAGCCTATGCT CTATTCCAAGGCGATGAAGTTACTCAACCATTTGTAATAGACGAGAAAACAGCAGAAATT CGCCTGAAAAGGGCATTGGATTTCGAGGCAACTCCATATTATAACGTGGAAATTGTAGCC ACAGATGGTGGGGGCCTTTCAGGAAAATGCACTGTGGCTATAGAAGTGGTGGATGTGAAT GACAACGCCCCTGAACTCACCATGTCTACGCTCTCCAGCCCTACCCCAGAAAATGCCCCG GAAACTGTAGTTGCCGTTTTCAGTGTTTCTGATCCAGACTCCGGGGACAACGGTAGGATG ATTTGCTCCATCCAGAATGATCTCCCCTTTCTTTTGAAGCCCACATTAAAAAACTTTTAC ACCCTAGTGACACAGAGAACACTGGACAGAGAGAGCCAAGCCGAGTACAACATCACCATC ACTGTCACCGACATGGGGACACCCAGGCTGAAAACCGAGCACAACATAACGGTCCTGGTC TCCGACGTCAATGACAACGCCCCCGCCTTCACCCAAACCTCCTACACCCTGTTCGTCCGA GAGAACAACAGCCCCGCCCTGCACATCGGCAGTGTCAGCGCCACAGACAGAGACTCAGGC ACCAACGCCCAGGTCACCTACTCGCTGCTGCCGCCCCAGAACCCACACCTGCGCCTCGCC TCCCTGGTCTCCATCAACGCGGACAACGGCCACCTGTTTGCCCTCAGGTCGCTGGACTAC GAGGCCCTGCAGGCGTTCGAGTTCCGCGTGGGAGCCACAGACCGCGGCTCCCCGGCGCTG AGCAGCGAGGCGCTGGTGCGCGTGCTGGTGCTGGACGCCAACGACAACTCGCCCTTCGTG CTGTATCCGCTGCAGAACGGCTCGGCGCCTTGCACCGAGCTGGTGCCCCGGGCGGCCGAG CCGGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACGGCGACTCGGGCCAGAACGCCTGG CTGTCGTACCAGCTGCTCAAGGCCACGGAGCCCGGGCTGTTCAGCATGTGGGCGCACAAT GGCGAGGTGCGCACCGCCAGGCTGCTGAGCGAGCGCGACGCGGCCAAGCACAGGCTGGTG GTGCTGGTCAAGGACAATGGCGAGCCTCCGCGCTCGGCCACCGCCACGCTGCACGTGCTC CTGGTGGACGGCTTCTCCCAGCCCTACCTGCCGCTGCCGGAGGCGGCCCCGGCCCAGGCC CAGGCCGACTCGCTCACTGTCTACCTGGTGGTGGCATTGGCCTCGGTGTCGTCGCTCTTC CTCTTTTCGGTGCTCCTGTTCGTGGCAGTGCGGCTGTGCAGGAGGAGCAGGGCGGCCTCG GTCGGTCGCTGCTCGGTGCCCGAGGGCCCCTTTCCAGGGCATCTGGTGGACGTGAGCGGC ACCGGGACCCTATCCCAGAGCTACCACTACGAGGTGTGTTTGACCGGAGACTCAGGGGCC GGCGAGTTCAAGTTCCTGAAGCCGATTATTCCTAACCTTTTGCCCCAGGGCGCTGGTGAA GAAATAGGGAAAACTGCTGCCTTCCGGAATAGCTTTGGATTAAATTAG |
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| Protein Properties | ||||||||||||||||
| Number of Residues | 795 | |||||||||||||||
| Molecular Weight | 86421.8 | |||||||||||||||
| Theoretical pI | 4.62 | |||||||||||||||
| Pfam Domain Function | ||||||||||||||||
| Signals |
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| Transmembrane Regions |
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| Protein Sequence |
>Protocadherin beta-5 METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDEVTQPFVIDEKTAEI RLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAP ETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITI TVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSG TNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPAL SSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW LSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVL LVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAAS VGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGE EIGKTAAFRNSFGLN |
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| External Links | ||||||||||||||||
| GenBank ID Protein | 33150746 | |||||||||||||||
| UniProtKB/Swiss-Prot ID | Q9Y5E4 | |||||||||||||||
| UniProtKB/Swiss-Prot Entry Name | PCDB5_HUMAN | |||||||||||||||
| PDB IDs | Not Available | |||||||||||||||
| GenBank Gene ID | AF134474 | |||||||||||||||
| GeneCard ID | PCDHB5 | |||||||||||||||
| GenAtlas ID | PCDHB5 | |||||||||||||||
| HGNC ID | HGNC:8690 | |||||||||||||||
| References | ||||||||||||||||
| General References |
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