Hmdb loader
Identification
HMDB Protein ID HMDBP07623
Secondary Accession Numbers
  • 13332
Name Copine-5
Synonyms
  1. Copine V
Gene Name CPNE5
Protein Type Unknown
Biological Properties
General Function Not Available
Specific Function May function in membrane trafficking. Exhibits calcium- dependent phospholipid binding properties
Pathways Not Available
Reactions Not Available
GO Classification Not Available
Cellular Location Not Available
Gene Properties
Chromosome Location Chromosome:6
Locus 6p21.1
SNPs CPNE5
Gene Sequence
>1782 bp
ATGGAGCAGCCTGAGGACATGGCGTCGCTGAGCGAGTTCGACTCCTTGGCGGGCAGCATC
CCGGCCACCAAGGTGGAGATCACCGTGTCCTGCAGGAACCTCCTGGACAAAGACATGTTT
TCCAAGTCCGACCCACTGTGCGTCATGTATACCCAAGGGATGGAGAACAAGCAGTGGCGG
GAGTTTGGGCGCACCGAAGTCATCGACAACACGCTCAATCCTGACTTCGTGCGCAAGTTC
ATTGTGGATTACTTTTTCGAGGAGAAGCAGAACCTCCGTTTTGATCTATACGACGTTGAC
TCTAAGAGTCCTGATTTATCCAAACACGATTTCCTGGGCCAGGCCTTCTGCACCCTTGGA
GAGATTGTGGGGTCCCCTGGGAGCCGCCTGGAAAAGCCCCTCACGATAGGCGCATTCAGC
CTGAATTCCAGGACGGGCAAACCCATGCCAGCTGTGTCCAACGGTGGTGTCCCAGGAAAG
AAATGTGGCACCATCATCCTGTCCGCTGAGGAGCTCAGCAACTGTAGGGATGTCGCCACC
ATGCAGTTCTGTGCCAACAAGCTGGACAAGAAAGATTTCTTTGGGAAATCTGACCCCTTC
TTGGTATTCTACAGAAGCAACGAGGATGGAACGTTCACCATTTGCCACAAGACCGAGGTC
ATGAAGAACACCCTAAATCCAGTCTGGCAAACTTTCTCCATTCCCGTGAGAGCCCTCTGC
AACGGCGACTACGATCGGACCATCAAGGTGGAGGTGTACGACTGGGATCGGGACGGCAGC
CATGACTTCATTGGGGAGTTCACCACCAGTTACCGGGAGCTGGCCCGTGGGCAGAGCCAA
TTCAACATCTATGAGGTGGTAAACCCGAAAAAGAAAATGAAGAAAAAGAAATACGTGAAT
TCTGGCACAGTCACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTTCCTTGACTAC
ATCAAAGGAGGGACCCAGATCAACTTCACTGTGGCCATTGATTTCACTGCCTCCAATGGG
AACCCCTCACAGTCCACATCCCTGCACTACATGAGCCCCTACCAGCTGAACGCCTACGCG
CTGGCGCTGACTGCCGTCGGAGAGATCATCCAGCACTACGACAGTGACAAGATGTTCCCT
GCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGATGGCAGAGTGTCCCACGAGTTCCCACTG
AATGGCAACCAGGAGAACCCCTCATGCTGTGGCATCGACGGCATCCTGGAGGCCTACCAC
CGCAGCCTGCGCACTGTGCAGCTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCAC
GTGGCCAGGAATGCAGCGGCCGTGCAGGATGGCTCCCAGTACTCGGTGCTGCTCATCATT
ACTGATGGGGTCATCTCGGACATGGCGCAGACCAAGGAGGCCATTGTCAACGCTGCCAAG
CTCCCCATGTCCATCATTATCGTCGGCGTGGGCCAGGCAGAGTTCGACGCCATGGTGGAG
CTGGATGGCGACGACGTGCGGATCTCCTCCCGGGGGAAGCTGGCTGAACGCGACATCGTC
CAGTTTGTACCCTTCCGGGACTACGTGGACCGCACAGGCAACCACGTGCTGAGCATGGCC
CGCCTGGCCCGAGACGTGCTGGCAGAGATCCCTGACCAACTGGTGTCCTACATGAAGGCA
CAGGGCATTCGCCCGCGTCCCCCACCCGCAGCACCAACCCACTCGCCCTCGCAGTCCCCA
GCCCGCACGCCCCCTGCGTCCCCCCTGCACACGCACATCTGA
Protein Properties
Number of Residues 593
Molecular Weight 65733.0
Theoretical pI 5.81
Pfam Domain Function
Signals
  • None
Transmembrane Regions
  • None
Protein Sequence
>Copine-5
MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDPLCVMYTQGMENKQWR
EFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLG
EIVGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNGGVPGKKCGTIILSAEELSNCRDVAT
MQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQTFSIPVRALC
NGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVVNPKKKMKKKKYVN
SGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNGNPSQSTSLHYMSPYQLNAYA
LALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYH
RSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQTKEAIVNAAK
LPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFVPFRDYVDRTGNHVLSMA
RLARDVLAEIPDQLVSYMKAQGIRPRPPPAAPTHSPSQSPARTPPASPLHTHI
GenBank ID Protein 25141323
UniProtKB/Swiss-Prot ID Q9HCH3
UniProtKB/Swiss-Prot Entry Name CPNE5_HUMAN
PDB IDs Not Available
GenBank Gene ID NM_020939.1
GeneCard ID CPNE5
GenAtlas ID CPNE5
HGNC ID HGNC:2318
References
General References
  1. Mungall AJ, Palmer SA, Sims SK, Edwards CA, Ashurst JL, Wilming L, Jones MC, Horton R, Hunt SE, Scott CE, Gilbert JG, Clamp ME, Bethel G, Milne S, Ainscough R, Almeida JP, Ambrose KD, Andrews TD, Ashwell RI, Babbage AK, Bagguley CL, Bailey J, Banerjee R, Barker DJ, Barlow KF, Bates K, Beare DM, Beasley H, Beasley O, Bird CP, Blakey S, Bray-Allen S, Brook J, Brown AJ, Brown JY, Burford DC, Burrill W, Burton J, Carder C, Carter NP, Chapman JC, Clark SY, Clark G, Clee CM, Clegg S, Cobley V, Collier RE, Collins JE, Colman LK, Corby NR, Coville GJ, Culley KM, Dhami P, Davies J, Dunn M, Earthrowl ME, Ellington AE, Evans KA, Faulkner L, Francis MD, Frankish A, Frankland J, French L, Garner P, Garnett J, Ghori MJ, Gilby LM, Gillson CJ, Glithero RJ, Grafham DV, Grant M, Gribble S, Griffiths C, Griffiths M, Hall R, Halls KS, Hammond S, Harley JL, Hart EA, Heath PD, Heathcott R, Holmes SJ, Howden PJ, Howe KL, Howell GR, Huckle E, Humphray SJ, Humphries MD, Hunt AR, Johnson CM, Joy AA, Kay M, Keenan SJ, Kimberley AM, King A, Laird GK, Langford C, Lawlor S, Leongamornlert DA, Leversha M, Lloyd CR, Lloyd DM, Loveland JE, Lovell J, Martin S, Mashreghi-Mohammadi M, Maslen GL, Matthews L, McCann OT, McLaren SJ, McLay K, McMurray A, Moore MJ, Mullikin JC, Niblett D, Nickerson T, Novik KL, Oliver K, Overton-Larty EK, Parker A, Patel R, Pearce AV, Peck AI, Phillimore B, Phillips S, Plumb RW, Porter KM, Ramsey Y, Ranby SA, Rice CM, Ross MT, Searle SM, Sehra HK, Sheridan E, Skuce CD, Smith S, Smith M, Spraggon L, Squares SL, Steward CA, Sycamore N, Tamlyn-Hall G, Tester J, Theaker AJ, Thomas DW, Thorpe A, Tracey A, Tromans A, Tubby B, Wall M, Wallis JM, West AP, White SS, Whitehead SL, Whittaker H, Wild A, Willey DJ, Wilmer TE, Wood JM, Wray PW, Wyatt JC, Young L, Younger RM, Bentley DR, Coulson A, Durbin R, Hubbard T, Sulston JE, Dunham I, Rogers J, Beck S: The DNA sequence and analysis of human chromosome 6. Nature. 2003 Oct 23;425(6960):805-11. [PubMed:14574404 ]
  2. Dephoure N, Zhou C, Villen J, Beausoleil SA, Bakalarski CE, Elledge SJ, Gygi SP: A quantitative atlas of mitotic phosphorylation. Proc Natl Acad Sci U S A. 2008 Aug 5;105(31):10762-7. doi: 10.1073/pnas.0805139105. Epub 2008 Jul 31. [PubMed:18669648 ]
  3. Nagase T, Kikuno R, Nakayama M, Hirosawa M, Ohara O: Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. DNA Res. 2000 Aug 31;7(4):273-81. [PubMed:10997877 ]