Hmdb loader
Identification
HMDB Protein ID HMDBP07622
Secondary Accession Numbers
  • 13331
Name Copine-4
Synonyms
  1. Copine IV
  2. Copine-8
Gene Name CPNE4
Protein Type Unknown
Biological Properties
General Function Not Available
Specific Function May function in membrane trafficking. Exhibits calcium- dependent phospholipid binding properties
Pathways Not Available
Reactions Not Available
GO Classification Not Available
Cellular Location Not Available
Gene Properties
Chromosome Location Chromosome:3
Locus 3q22.1
SNPs CPNE4
Gene Sequence
>1674 bp
ATGAAGAAGATGAGCAACATTTATGAGTCCGCTGCCAACACACTGGGAATCTTTAACAGC
CCCTGCCTGACCAAAGTTGAGCTGCGTGTGGCGTGCAAAGGCATTTCTGACAGAGATGCC
CTTTCCAAACCAGACCCCTGTGTCATCCTCAAGATGCAGTCTCATGGGCAGTGGTTTGAG
GTTGACAGGACTGAGGTGATTCGCACCTGCATAAACCCAGTGTACTCAAAACTGTTTACT
GTGGACTTTTACTTTGAGGAGGTGCAGCGCCTGCGGTTTGAAGTCCATGACATCAGCAGC
AACCACAATGGGCTGAAGGAGGCCGACTTCCTTGGTGGCATGGAGTGCACACTTGGCCAG
ATTGTTTCCCAGAGAAAGCTGTCCAAATCCTTGCTGAAGCATGGGAACACAGCAGGGAAA
TCTTCCATCACGGTGATTGCTGAAGAATTATCTGGCAATGACGACTATGTTGAGCTTGCA
TTCAATGCACGGAAATTGGATGACAAGGATTTCTTCAGTAAATCTGACCCATTTCTGGAA
ATTTTTCGTATGAATGATGATGCAACTCAGCAGCTGGTGCACCGAACTGAGGTTGTGATG
AATAACTTAAGCCCAGCCTGGAAATCATTCAAAGTATCTGTAAATTCTCTATGCAGCGGA
GACCCAGACCGCCGGCTAAAGTGCATAGTATGGGACTGGGACTCCAATGGCAAGCATGAC
TTCATTGGAGAATTCACCTCGACATTCAAGGAGATGAGAGGAGCAATGGAAGGGAAACAG
GTGCAGTGGGAGTGCATCAATCCCAAGTACAAAGCCAAGAAGAAGAATTACAAGAACTCA
GGCACTGTGATTCTGAATCTGTGCAAGATTCACAAGATGCATTCTTTCTTGGACTACATC
ATGGGTGGCTGCCAAATCCAGTTTACAGTAGCTATAGATTTCACTGCCTCAAACGGGGAC
CCCAGGAACAGCTGTTCCTTGCACTACATCCACCCTTACCAACCCAATGAGTATCTGAAA
GCTTTGGTAGCTGTGGGGGAGATTTGCCAAGACTATGACAGTGACAAAATGTTCCCTGCC
TTTGGGTTTGGCGCCAGGATACCTCCAGAGTACACGGTCTCTCATGACTTTGCAATCAAC
TTTAATGAAGACAACCCAGAATGTGCAGGAATTCAAGGAGTTGTGGAAGCCTATCAGAGC
TGTCTTCCTAAGCTCCAACTCTATGGTCCCACCAACATTGCCCCCATCATCCAGAAGGTT
GCCAAGTCAGCGTCAGAGGAAACTAACACCAAGGAGGCATCGCAATACTTCATCCTGCTG
ATCCTGACAGATGGTGTTATCACAGACATGGCCGACACCCGGGAGGCCATTGTCCATGCC
TCCCACCTCCCCATGTCAGTCATCATCGTGGGAGTAGGGAACGCTGACTTCAGTGACATG
CAGATGCTGGACGGTGATGATGGGATTCTGAGGTCACCCAAGGGAGAGCCTGTTCTTCGA
GACATCGTCCAGTTCGTGCCCTTCAGGAACTTCAAACACGCATCTCCAGCTGCCCTGGCA
AAGAGCGTGCTGGCTGAAGTCCCAAACCAAGTTGTGGACTATTACAATGGCAAAGGAATT
AAACCAAAATGTTCATCAGAAATGTATGAATCTTCCAGAACACTAGCACCATGA
Protein Properties
Number of Residues 557
Molecular Weight 62394.6
Theoretical pI 6.28
Pfam Domain Function
Signals
  • None
Transmembrane Regions
  • None
Protein Sequence
>Copine-4
MKKMSNIYESAANTLGIFNSPCLTKVELRVACKGISDRDALSKPDPCVILKMQSHGQWFE
VDRTEVIRTCINPVYSKLFTVDFYFEEVQRLRFEVHDISSNHNGLKEADFLGGMECTLGQ
IVSQRKLSKSLLKHGNTAGKSSITVIAEELSGNDDYVELAFNARKLDDKDFFSKSDPFLE
IFRMNDDATQQLVHRTEVVMNNLSPAWKSFKVSVNSLCSGDPDRRLKCIVWDWDSNGKHD
FIGEFTSTFKEMRGAMEGKQVQWECINPKYKAKKKNYKNSGTVILNLCKIHKMHSFLDYI
MGGCQIQFTVAIDFTASNGDPRNSCSLHYIHPYQPNEYLKALVAVGEICQDYDSDKMFPA
FGFGARIPPEYTVSHDFAINFNEDNPECAGIQGVVEAYQSCLPKLQLYGPTNIAPIIQKV
AKSASEETNTKEASQYFILLILTDGVITDMADTREAIVHASHLPMSVIIVGVGNADFSDM
QMLDGDDGILRSPKGEPVLRDIVQFVPFRNFKHASPAALAKSVLAEVPNQVVDYYNGKGI
KPKCSSEMYESSRTLAP
GenBank ID Protein 18496661
UniProtKB/Swiss-Prot ID Q96A23
UniProtKB/Swiss-Prot Entry Name CPNE4_HUMAN
PDB IDs Not Available
GenBank Gene ID AF465770
GeneCard ID CPNE4
GenAtlas ID CPNE4
HGNC ID HGNC:2317
References
General References
  1. Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, Irie R, Wakamatsu A, Hayashi K, Sato H, Nagai K, Kimura K, Makita H, Sekine M, Obayashi M, Nishi T, Shibahara T, Tanaka T, Ishii S, Yamamoto J, Saito K, Kawai Y, Isono Y, Nakamura Y, Nagahari K, Murakami K, Yasuda T, Iwayanagi T, Wagatsuma M, Shiratori A, Sudo H, Hosoiri T, Kaku Y, Kodaira H, Kondo H, Sugawara M, Takahashi M, Kanda K, Yokoi T, Furuya T, Kikkawa E, Omura Y, Abe K, Kamihara K, Katsuta N, Sato K, Tanikawa M, Yamazaki M, Ninomiya K, Ishibashi T, Yamashita H, Murakawa K, Fujimori K, Tanai H, Kimata M, Watanabe M, Hiraoka S, Chiba Y, Ishida S, Ono Y, Takiguchi S, Watanabe S, Yosida M, Hotuta T, Kusano J, Kanehori K, Takahashi-Fujii A, Hara H, Tanase TO, Nomura Y, Togiya S, Komai F, Hara R, Takeuchi K, Arita M, Imose N, Musashino K, Yuuki H, Oshima A, Sasaki N, Aotsuka S, Yoshikawa Y, Matsunawa H, Ichihara T, Shiohata N, Sano S, Moriya S, Momiyama H, Satoh N, Takami S, Terashima Y, Suzuki O, Nakagawa S, Senoh A, Mizoguchi H, Goto Y, Shimizu F, Wakebe H, Hishigaki H, Watanabe T, Sugiyama A, Takemoto M, Kawakami B, Yamazaki M, Watanabe K, Kumagai A, Itakura S, Fukuzumi Y, Fujimori Y, Komiyama M, Tashiro H, Tanigami A, Fujiwara T, Ono T, Yamada K, Fujii Y, Ozaki K, Hirao M, Ohmori Y, Kawabata A, Hikiji T, Kobatake N, Inagaki H, Ikema Y, Okamoto S, Okitani R, Kawakami T, Noguchi S, Itoh T, Shigeta K, Senba T, Matsumura K, Nakajima Y, Mizuno T, Morinaga M, Sasaki M, Togashi T, Oyama M, Hata H, Watanabe M, Komatsu T, Mizushima-Sugano J, Satoh T, Shirai Y, Takahashi Y, Nakagawa K, Okumura K, Nagase T, Nomura N, Kikuchi H, Masuho Y, Yamashita R, Nakai K, Yada T, Nakamura Y, Ohara O, Isogai T, Sugano S: Complete sequencing and characterization of 21,243 full-length human cDNAs. Nat Genet. 2004 Jan;36(1):40-5. Epub 2003 Dec 21. [PubMed:14702039 ]
  2. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
  3. Maitra R, Grigoryev DN, Bera TK, Pastan IH, Lee B: Cloning, molecular characterization, and expression analysis of Copine 8. Biochem Biophys Res Commun. 2003 Apr 11;303(3):842-7. [PubMed:12670487 ]