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Record Information

Version

5.0

Status

Detected but not Quantified

Creation Date

2021-09-22 16:32:33 UTC

Update Date

2022-09-22 18:34:37 UTC

HMDB ID

HMDB0301709

Secondary Accession Numbers

None

Metabolite Identification

Common Name

5-p-Coumaroylquinic acid

Description

5-p-coumaroylquinic acid, also known as trans-5-O-(4-coumaroyl)-D-quinate or P-coumaroyl quinate, belongs to quinic acids and derivatives class of compounds. Those are compounds containing a quinic acid moiety (or a derivative thereof), which is a cyclitol made up of a cyclohexane ring that bears four hydroxyl groups at positions 1,3.4, and 5, as well as a carboxylic acid at position 1. 5-p-coumaroylquinic acid is slightly soluble (in water) and a weakly acidic compound (based on its pKa). 5-p-coumaroylquinic acid can be found in a number of food items such as wild leek, brussel sprouts, ucuhuba, and lemon grass, which makes 5-p-coumaroylquinic acid a potential biomarker for the consumption of these food products.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0301709
     RDKit          3D
5-p-Coumaroylquinic acid
 42 43  0  0  0  0  0  0  0  0999 V2000
    0.0410    1.2035   -2.4306 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5047    0.7081   -1.4044 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9641    0.7401   -1.1869 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5082    0.2283   -0.1141 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9441    0.2663    0.0873 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8517    0.8155   -0.7794 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2262    0.8139   -0.5148 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7356    0.2600    0.6310 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0964    0.2432    0.9219 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8348   -0.2966    1.5132 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4843   -0.2981    1.2589 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3161    0.1394   -0.4836 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7112    0.0414   -0.5636 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4159    0.6117    0.6376 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8828    0.2955    0.6047 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.5278    0.9687   -0.4291 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4672    0.7416    1.8911 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0751    0.2969    3.0021 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4830    1.6811    1.9038 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1660   -1.1747    0.4191 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5108   -1.5657   -0.9066 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9064   -0.5836   -1.8310 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0245   -1.4515   -0.6531 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2543   -2.1002   -1.5831 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5456    1.2105   -1.9670 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8298   -0.2189    0.6036 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4790    1.2628   -1.6974 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9006    1.2570   -1.2253 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5396    1.0050    1.4390 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2414   -0.7330    2.4168 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7844   -0.7400    1.9621 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0487    0.4994   -1.4953 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9923    0.1689    1.5540 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3254    1.7172    0.5996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5017    0.9522   -0.2395 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4869    2.5087    1.3070 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2572   -1.2869    0.3132 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7235   -1.7866    1.2165 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8095   -2.5652   -1.2393 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5090   -0.9195   -2.5158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8122   -1.8484    0.3806 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3042   -3.0681   -1.4031 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  8 10  1  0
 10 11  2  0
  2 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  6
 15 17  1  0
 17 18  2  0
 17 19  1  0
 15 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 11  5  1  0
 23 13  1  0
  3 25  1  0
  4 26  1  0
  6 27  1  0
  7 28  1  0
  9 29  1  0
 10 30  1  0
 11 31  1  0
 13 32  1  6
 14 33  1  0
 14 34  1  0
 16 35  1  0
 19 36  1  0
 20 37  1  0
 20 38  1  0
 21 39  1  6
 22 40  1  0
 23 41  1  1
 24 42  1  0
M  END


  Mrv1652303082008162D          

 24 25  0  0  1  0            999 V2000
   -0.7145   -5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -4.9500    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0000   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -3.7125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.1842   -3.0805    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -4.9500    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.1434   -5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -6.6000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -7.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -7.8375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -7.8375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -7.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -5.3625    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7145   -6.1875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2448   -3.0805    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9626   -2.3053    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0572   -3.2238    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  6  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  6  0  0  0
  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  1  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 16 18  1  0  0  0  0
 18 19  2  0  0  0  0
 13 19  1  0  0  0  0
  7 20  1  0  0  0  0
  2 20  1  0  0  0  0
 20 21  1  6  0  0  0
  4 22  1  1  0  0  0
 22 23  1  0  0  0  0
 22 24  2  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0301709

> <DATABASE_NAME>
hmdb

> <SMILES>
O[C@@H]1C[C@](O)(C[C@@H](OC(=O)\C=C\C2=CC=C(O)C=C2)[C@@H]1O)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C16H18O8/c17-10-4-1-9(2-5-10)3-6-13(19)24-12-8-16(23,15(21)22)7-11(18)14(12)20/h1-6,11-12,14,17-18,20,23H,7-8H2,(H,21,22)/b6-3+/t11-,12-,14-,16+/m1/s1

> <INCHI_KEY>
BMRSEYFENKXDIS-OTCYKTEZSA-N

> <FORMULA>
C16H18O8

> <MOLECULAR_WEIGHT>
338.3093

> <EXACT_MASS>
338.100167552

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
42

> <JCHEM_AVERAGE_POLARIZABILITY>
32.5121369567172

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,3R,4R,5R)-1,3,4-trihydroxy-5-{[(2E)-3-(4-hydroxyphenyl)prop-2-enoyl]oxy}cyclohexane-1-carboxylic acid

> <ALOGPS_LOGP>
0.13

> <JCHEM_LOGP>
0.03503556366666648

> <ALOGPS_LOGS>
-1.94

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
9.3985010684776

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.359492048541407

> <JCHEM_PKA_STRONGEST_BASIC>
-3.231823980915407

> <JCHEM_POLAR_SURFACE_AREA>
144.52

> <JCHEM_REFRACTIVITY>
81.25380000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.92e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
p-coumaroyl quinic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0301709
     RDKit          3D
5-p-Coumaroylquinic acid
 42 43  0  0  0  0  0  0  0  0999 V2000
    0.0410    1.2035   -2.4306 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5047    0.7081   -1.4044 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9641    0.7401   -1.1869 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5082    0.2283   -0.1141 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9441    0.2663    0.0873 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8517    0.8155   -0.7794 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2262    0.8139   -0.5148 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7356    0.2600    0.6310 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0964    0.2432    0.9219 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8348   -0.2966    1.5132 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4843   -0.2981    1.2589 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3161    0.1394   -0.4836 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7112    0.0414   -0.5636 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4159    0.6117    0.6376 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8828    0.2955    0.6047 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.5278    0.9687   -0.4291 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4672    0.7416    1.8911 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0751    0.2969    3.0021 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4830    1.6811    1.9038 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1660   -1.1747    0.4191 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5108   -1.5657   -0.9066 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9064   -0.5836   -1.8310 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0245   -1.4515   -0.6531 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2543   -2.1002   -1.5831 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5456    1.2105   -1.9670 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8298   -0.2189    0.6036 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4790    1.2628   -1.6974 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9006    1.2570   -1.2253 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5396    1.0050    1.4390 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2414   -0.7330    2.4168 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7844   -0.7400    1.9621 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0487    0.4994   -1.4953 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9923    0.1689    1.5540 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3254    1.7172    0.5996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5017    0.9522   -0.2395 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4869    2.5087    1.3070 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2572   -1.2869    0.3132 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7235   -1.7866    1.2165 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8095   -2.5652   -1.2393 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5090   -0.9195   -2.5158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8122   -1.8484    0.3806 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3042   -3.0681   -1.4031 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  8 10  1  0
 10 11  2  0
  2 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  6
 15 17  1  0
 17 18  2  0
 17 19  1  0
 15 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 11  5  1  0
 23 13  1  0
  3 25  1  0
  4 26  1  0
  6 27  1  0
  7 28  1  0
  9 29  1  0
 10 30  1  0
 11 31  1  0
 13 32  1  6
 14 33  1  0
 14 34  1  0
 16 35  1  0
 19 36  1  0
 20 37  1  0
 20 38  1  0
 21 39  1  6
 22 40  1  0
 23 41  1  1
 24 42  1  0
M  END

HEADER    PROTEIN                                 08-MAR-20   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-MAR-20         0                                  
HETATM    1  O   UNK     0      -1.334 -10.010   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0       0.000  -9.240   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.000  -7.700   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.334  -6.930   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       0.344  -5.750   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       2.667  -7.700   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.667  -9.240   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       4.001 -10.010   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       4.001 -11.550   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       2.667 -12.320   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       5.335 -12.320   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.668 -11.550   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       8.002 -12.320   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       9.336 -11.550   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      10.669 -12.320   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      10.669 -13.860   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      12.003 -14.630   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       9.336 -14.630   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       8.002 -13.860   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.334 -10.010   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       1.334 -11.550   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       2.324  -5.750   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       1.797  -4.303   0.000  0.00  0.00           O+0
HETATM   24  O   UNK     0       3.840  -6.018   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   20                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5    6   22                                             
CONECT    5    4                                                            
CONECT    6    4    7                                                       
CONECT    7    6    8   20                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   19                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   13                                                       
CONECT   20    7    2   21                                                  
CONECT   21   20                                                            
CONECT   22    4   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22                                                            
MASTER        0    0    0    0    0    0    0    0   24    0   50    0
END

COMPND    HMDB0301709
HETATM    1  O1  UNL     1       0.041   1.203  -2.431  1.00  0.00           O  
HETATM    2  C1  UNL     1       0.505   0.708  -1.404  1.00  0.00           C  
HETATM    3  C2  UNL     1       1.964   0.740  -1.187  1.00  0.00           C  
HETATM    4  C3  UNL     1       2.508   0.228  -0.114  1.00  0.00           C  
HETATM    5  C4  UNL     1       3.944   0.266   0.087  1.00  0.00           C  
HETATM    6  C5  UNL     1       4.852   0.815  -0.779  1.00  0.00           C  
HETATM    7  C6  UNL     1       6.226   0.814  -0.515  1.00  0.00           C  
HETATM    8  C7  UNL     1       6.736   0.260   0.631  1.00  0.00           C  
HETATM    9  O2  UNL     1       8.096   0.243   0.922  1.00  0.00           O  
HETATM   10  C8  UNL     1       5.835  -0.297   1.513  1.00  0.00           C  
HETATM   11  C9  UNL     1       4.484  -0.298   1.259  1.00  0.00           C  
HETATM   12  O3  UNL     1      -0.316   0.139  -0.484  1.00  0.00           O  
HETATM   13  C10 UNL     1      -1.711   0.041  -0.564  1.00  0.00           C  
HETATM   14  C11 UNL     1      -2.416   0.612   0.638  1.00  0.00           C  
HETATM   15  C12 UNL     1      -3.883   0.295   0.605  1.00  0.00           C  
HETATM   16  O4  UNL     1      -4.528   0.969  -0.429  1.00  0.00           O  
HETATM   17  C13 UNL     1      -4.467   0.742   1.891  1.00  0.00           C  
HETATM   18  O5  UNL     1      -4.075   0.297   3.002  1.00  0.00           O  
HETATM   19  O6  UNL     1      -5.483   1.681   1.904  1.00  0.00           O  
HETATM   20  C14 UNL     1      -4.166  -1.175   0.419  1.00  0.00           C  
HETATM   21  C15 UNL     1      -3.511  -1.566  -0.907  1.00  0.00           C  
HETATM   22  O7  UNL     1      -3.906  -0.584  -1.831  1.00  0.00           O  
HETATM   23  C16 UNL     1      -2.025  -1.452  -0.653  1.00  0.00           C  
HETATM   24  O8  UNL     1      -1.254  -2.100  -1.583  1.00  0.00           O  
HETATM   25  H1  UNL     1       2.546   1.211  -1.967  1.00  0.00           H  
HETATM   26  H2  UNL     1       1.830  -0.219   0.604  1.00  0.00           H  
HETATM   27  H3  UNL     1       4.479   1.263  -1.697  1.00  0.00           H  
HETATM   28  H4  UNL     1       6.901   1.257  -1.225  1.00  0.00           H  
HETATM   29  H5  UNL     1       8.540   1.005   1.439  1.00  0.00           H  
HETATM   30  H6  UNL     1       6.241  -0.733   2.417  1.00  0.00           H  
HETATM   31  H7  UNL     1       3.784  -0.740   1.962  1.00  0.00           H  
HETATM   32  H8  UNL     1      -2.049   0.499  -1.495  1.00  0.00           H  
HETATM   33  H9  UNL     1      -1.992   0.169   1.554  1.00  0.00           H  
HETATM   34  H10 UNL     1      -2.325   1.717   0.600  1.00  0.00           H  
HETATM   35  H11 UNL     1      -5.502   0.952  -0.240  1.00  0.00           H  
HETATM   36  H12 UNL     1      -5.487   2.509   1.307  1.00  0.00           H  
HETATM   37  H13 UNL     1      -5.257  -1.287   0.313  1.00  0.00           H  
HETATM   38  H14 UNL     1      -3.724  -1.787   1.217  1.00  0.00           H  
HETATM   39  H15 UNL     1      -3.809  -2.565  -1.239  1.00  0.00           H  
HETATM   40  H16 UNL     1      -4.509  -0.919  -2.516  1.00  0.00           H  
HETATM   41  H17 UNL     1      -1.812  -1.848   0.381  1.00  0.00           H  
HETATM   42  H18 UNL     1      -1.304  -3.068  -1.403  1.00  0.00           H  
CONECT    1    2    2
CONECT    2    3   12
CONECT    3    4    4   25
CONECT    4    5   26
CONECT    5    6    6   11
CONECT    6    7   27
CONECT    7    8    8   28
CONECT    8    9   10
CONECT    9   29
CONECT   10   11   11   30
CONECT   11   31
CONECT   12   13
CONECT   13   14   23   32
CONECT   14   15   33   34
CONECT   15   16   17   20
CONECT   16   35
CONECT   17   18   18   19
CONECT   19   36
CONECT   20   21   37   38
CONECT   21   22   23   39
CONECT   22   40
CONECT   23   24   41
CONECT   24   42
END

HMDB0301709
     RDKit          3D
5-p-Coumaroylquinic acid
 42 43  0  0  0  0  0  0  0  0999 V2000
    0.0410    1.2035   -2.4306 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5047    0.7081   -1.4044 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9641    0.7401   -1.1869 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5082    0.2283   -0.1141 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9441    0.2663    0.0873 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8517    0.8155   -0.7794 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2262    0.8139   -0.5148 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7356    0.2600    0.6310 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0964    0.2432    0.9219 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8348   -0.2966    1.5132 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4843   -0.2981    1.2589 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3161    0.1394   -0.4836 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7112    0.0414   -0.5636 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4159    0.6117    0.6376 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8828    0.2955    0.6047 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.5278    0.9687   -0.4291 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4672    0.7416    1.8911 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0751    0.2969    3.0021 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4830    1.6811    1.9038 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1660   -1.1747    0.4191 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5108   -1.5657   -0.9066 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9064   -0.5836   -1.8310 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0245   -1.4515   -0.6531 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2543   -2.1002   -1.5831 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5456    1.2105   -1.9670 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8298   -0.2189    0.6036 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4790    1.2628   -1.6974 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9006    1.2570   -1.2253 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5396    1.0050    1.4390 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2414   -0.7330    2.4168 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7844   -0.7400    1.9621 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0487    0.4994   -1.4953 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9923    0.1689    1.5540 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3254    1.7172    0.5996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5017    0.9522   -0.2395 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4869    2.5087    1.3070 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2572   -1.2869    0.3132 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7235   -1.7866    1.2165 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8095   -2.5652   -1.2393 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5090   -0.9195   -2.5158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8122   -1.8484    0.3806 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3042   -3.0681   -1.4031 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  8 10  1  0
 10 11  2  0
  2 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  6
 15 17  1  0
 17 18  2  0
 17 19  1  0
 15 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 11  5  1  0
 23 13  1  0
  3 25  1  0
  4 26  1  0
  6 27  1  0
  7 28  1  0
  9 29  1  0
 10 30  1  0
 11 31  1  0
 13 32  1  6
 14 33  1  0
 14 34  1  0
 16 35  1  0
 19 36  1  0
 20 37  1  0
 20 38  1  0
 21 39  1  6
 22 40  1  0
 23 41  1  1
 24 42  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
p-Coumaroyl quinic acid	ChEBI
trans-5-O-(4-Coumaroyl)-D-quinate	ChEBI
p-Coumaroyl quinate	Generator
5-P-Coumaroylquinate	Generator
trans-5-O-(4-Coumaroyl)-D-quinic acid	Generator
2-Coumaroylquinic acid	MeSH
O-Coumaroylquinic acid	MeSH
5-PCoQA	MeSH

Chemical Formula

C₁₆H₁₈O₈

Average Molecular Weight

338.3093

Monoisotopic Molecular Weight

338.100167552

IUPAC Name

(1S,3R,4R,5R)-1,3,4-trihydroxy-5-{[(2E)-3-(4-hydroxyphenyl)prop-2-enoyl]oxy}cyclohexane-1-carboxylic acid

Traditional Name

p-coumaroyl quinic acid

CAS Registry Number

Not Available

SMILES

O[C@@H]1C[C@](O)(C[C@@H](OC(=O)\C=C\C2=CC=C(O)C=C2)[C@@H]1O)C(O)=O

InChI Identifier

InChI=1S/C16H18O8/c17-10-4-1-9(2-5-10)3-6-13(19)24-12-8-16(23,15(21)22)7-11(18)14(12)20/h1-6,11-12,14,17-18,20,23H,7-8H2,(H,21,22)/b6-3+/t11-,12-,14-,16+/m1/s1

InChI Key

BMRSEYFENKXDIS-OTCYKTEZSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as quinic acids and derivatives. Quinic acids and derivatives are compounds containing a quinic acid moiety (or a derivative thereof), which is a cyclitol made up of a cyclohexane ring that bears four hydroxyl groups at positions 1,3.4, And 5, as well as a carboxylic acid at position 1.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Alcohols and polyols

Direct Parent

Quinic acids and derivatives

Alternative Parents

Substituents

Coumaric acid ester
Quinic acid
Cinnamic acid or derivatives
Coumaric acid or derivatives
Hydroxycinnamic acid or derivatives
Cinnamic acid ester
Styrene
Phenol
Fatty acid ester
Cyclohexanol
1-hydroxy-2-unsubstituted benzenoid
Fatty acyl
Benzenoid
Alpha-hydroxy acid
Monocyclic benzene moiety
Hydroxy acid
Dicarboxylic acid or derivatives
Enoate ester
Tertiary alcohol
Alpha,beta-unsaturated carboxylic ester
Secondary alcohol
Carboxylic acid ester
Carboxylic acid
Carboxylic acid derivative
Polyol
Carbonyl group
Organic oxide
Hydrocarbon derivative
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

quinic acid (CHEBI:15937 )

Ontology

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	0.13	ALOGPS
logP	0.035	ChemAxon
logS	-1.9	ALOGPS
pKa (Strongest Acidic)	3.36	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	144.52 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	81.25 m³·mol⁻¹	ChemAxon
Polarizability	32.51 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
AllCCS	[M+H]+	178.28	32859911
AllCCS	[M+H-H2O]+	175.285	32859911
AllCCS	[M+Na]+	181.842	32859911
AllCCS	[M+NH4]+	181.048	32859911
AllCCS	[M-H]-	175.724	32859911
AllCCS	[M+Na-2H]-	175.737	32859911
AllCCS	[M+HCOO]-	175.884	32859911
DeepCCS	[M+H]+	170.528	30932474
DeepCCS	[M-H]-	168.132	30932474
DeepCCS	[M-2H]-	201.445	30932474
DeepCCS	[M+Na]+	176.44	30932474

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Predicted by Siyang on May 30, 2022	10.3496 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	5.76 minutes	32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	1250.4 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	206.1 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	89.8 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	158.9 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	65.1 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	327.5 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	321.2 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	465.4 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	664.6 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	256.0 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	1059.3 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	209.2 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	221.6 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	432.0 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	203.2 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	191.8 seconds	40023050

Predicted Kovats Retention Indices

Not Available

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - 5-p-Coumaroylquinic acid GC-MS (TMS_4_5) - 70eV, Positive	Not Available	2022-08-08	Wishart Lab	View Spectrum
MS	Mass Spectrum (Electron Ionization)	Not Available	2022-08-06	Not Available	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5-p-Coumaroylquinic acid 10V, Positive-QTOF	splash10-009m-0936000000-4575bb1f18835ad1f7c5	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5-p-Coumaroylquinic acid 20V, Positive-QTOF	splash10-002b-0911000000-5088a3a2e259bc6b8801	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5-p-Coumaroylquinic acid 40V, Positive-QTOF	splash10-002b-1900000000-5bb81d1e3b6075572c1d	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5-p-Coumaroylquinic acid 10V, Negative-QTOF	splash10-000f-0988000000-68ceb4befe110f98609f	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5-p-Coumaroylquinic acid 20V, Negative-QTOF	splash10-002e-1931000000-4f0bf43a1a7bcf541c7a	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5-p-Coumaroylquinic acid 40V, Negative-QTOF	splash10-0002-0900000000-debf809729d9088ae7a7	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5-p-Coumaroylquinic acid 10V, Positive-QTOF	splash10-0002-0946000000-d78957a03558e557100f	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5-p-Coumaroylquinic acid 20V, Positive-QTOF	splash10-014j-0900000000-46e6cf4cf6a54ee60670	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5-p-Coumaroylquinic acid 40V, Positive-QTOF	splash10-00kf-4910000000-7fff648cbfff88afe159	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5-p-Coumaroylquinic acid 10V, Negative-QTOF	splash10-0006-0902000000-600959b32de7a00f052c	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5-p-Coumaroylquinic acid 20V, Negative-QTOF	splash10-00xu-1900000000-89f3229591976d1bdbf9	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5-p-Coumaroylquinic acid 40V, Negative-QTOF	splash10-014i-3900000000-19ac9d611ec33e3333d1	2021-10-21	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Blood
Urine

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Biospecimen	Status	Value	Age	Sex	Condition	Reference	Details
Blood	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Cancer patients undergoing total body irradiation	31424920	details
Urine	Detected but not Quantified	Not Quantified	Not Specified	Not Specified	Cancer patients undergoing total body irradiation	31424920	details

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB000236

KNApSAcK ID

Not Available

Chemspider ID

4945466

KEGG Compound ID

C12208

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

15937

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Not Available

Showing metabocard for 5-p-Coumaroylquinic acid (HMDB0301709)

MOL for HMDB0301709 (5-p-Coumaroylquinic acid)

3D MOL for HMDB0301709 (5-p-Coumaroylquinic acid)

3D SDF for HMDB0301709 (5-p-Coumaroylquinic acid)

3D-SDF for HMDB0301709 (5-p-Coumaroylquinic acid)

PDB for HMDB0301709 (5-p-Coumaroylquinic acid)

3D PDB for HMDB0301709 (5-p-Coumaroylquinic acid)

SMILES for HMDB0301709 (5-p-Coumaroylquinic acid)

INCHI for HMDB0301709 (5-p-Coumaroylquinic acid)

Structure for HMDB0301709 (5-p-Coumaroylquinic acid)

3D Structure for HMDB0301709 (5-p-Coumaroylquinic acid)

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

GC-MS Spectra

MS/MS Spectra