Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2019-10-08 19:32:59 UTC
Update Date2022-03-07 03:18:18 UTC
HMDB IDHMDB0240504
Secondary Accession NumbersNone
Metabolite Identification
Common NameEnterodiol sulfate
DescriptionEnterodiol sulfate belongs to the class of organic compounds known as dibenzylbutanediol lignans. These are lignan compounds containing a 2,3-dibenzylbutane-1,4-diol moiety. Based on a literature review a significant number of articles have been published on Enterodiol sulfate.
Structure
Thumb
Synonyms
ValueSource
Enterodiol sulfuric acidGenerator
Enterodiol sulphateGenerator
Enterodiol sulphuric acidGenerator
{3-[(2R,3R)-4-hydroxy-2-(hydroxymethyl)-3-[(3-hydroxyphenyl)methyl]butyl]phenyl}oxidanesulfonateHMDB
{3-[(2R,3R)-4-hydroxy-2-(hydroxymethyl)-3-[(3-hydroxyphenyl)methyl]butyl]phenyl}oxidanesulphonateHMDB
{3-[(2R,3R)-4-hydroxy-2-(hydroxymethyl)-3-[(3-hydroxyphenyl)methyl]butyl]phenyl}oxidanesulphonic acidHMDB
Enterodiol monosulfateHMDB
Enterodiol monosulphateHMDB
Enterodiol sulfateHMDB
Chemical FormulaC18H22O7S
Average Molecular Weight382.43
Monoisotopic Molecular Weight382.108624222
IUPAC Name{3-[(2R,3R)-4-hydroxy-2-(hydroxymethyl)-3-[(3-hydroxyphenyl)methyl]butyl]phenyl}oxidanesulfonic acid
Traditional Name{3-[(2R,3R)-4-hydroxy-2-(hydroxymethyl)-3-[(3-hydroxyphenyl)methyl]butyl]phenyl}oxidanesulfonic acid
CAS Registry NumberNot Available
SMILES
[H][C@@](CO)(CC1=CC(O)=CC=C1)[C@]([H])(CO)CC1=CC(OS(O)(=O)=O)=CC=C1
InChI Identifier
InChI=1S/C18H22O7S/c19-11-15(7-13-3-1-5-17(21)9-13)16(12-20)8-14-4-2-6-18(10-14)25-26(22,23)24/h1-6,9-10,15-16,19-21H,7-8,11-12H2,(H,22,23,24)/t15-,16-/m0/s1
InChI KeyQFWYXPNNPTWNSP-HOTGVXAUSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as dibenzylbutanediol lignans. These are lignan compounds containing a 2,3-dibenzylbutane-1,4-diol moiety.
KingdomOrganic compounds
Super ClassLignans, neolignans and related compounds
ClassDibenzylbutane lignans
Sub ClassDibenzylbutanediol lignans
Direct ParentDibenzylbutanediol lignans
Alternative Parents
Substituents
  • Dibenzylbutanediol
  • Phenylsulfate
  • Arylsulfate
  • Phenoxy compound
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Benzenoid
  • Sulfuric acid ester
  • Sulfate-ester
  • Sulfuric acid monoester
  • Monocyclic benzene moiety
  • Organic sulfuric acid or derivatives
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Alcohol
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP0.21ALOGPS
logP0.49ChemAxon
logS-3.3ALOGPS
pKa (Strongest Acidic)-1.8ChemAxon
pKa (Strongest Basic)-2.6ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area124.29 ŲChemAxon
Rotatable Bond Count9ChemAxon
Refractivity96.35 m³·mol⁻¹ChemAxon
Polarizability37.35 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+184.40430932474
DeepCCS[M-H]-182.00830932474
DeepCCS[M-2H]-214.89230932474
DeepCCS[M+Na]+190.31630932474
AllCCS[M+H]+189.232859911
AllCCS[M+H-H2O]+186.332859911
AllCCS[M+NH4]+191.932859911
AllCCS[M+Na]+192.732859911
AllCCS[M-H]-186.932859911
AllCCS[M+Na-2H]-187.332859911
AllCCS[M+HCOO]-188.032859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.6.27 minutes32390414
Predicted by Siyang on May 30, 202211.6409 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20224.65 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid1607.6 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid226.6 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid155.8 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid167.2 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid132.6 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid454.9 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid412.9 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)151.9 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid918.8 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid445.7 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1233.2 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid283.2 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid310.0 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate269.9 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA154.9 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water106.1 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Enterodiol sulfate[H][C@@](CO)(CC1=CC(O)=CC=C1)[C@]([H])(CO)CC1=CC(OS(O)(=O)=O)=CC=C15557.5Standard polar33892256
Enterodiol sulfate[H][C@@](CO)(CC1=CC(O)=CC=C1)[C@]([H])(CO)CC1=CC(OS(O)(=O)=O)=CC=C13027.2Standard non polar33892256
Enterodiol sulfate[H][C@@](CO)(CC1=CC(O)=CC=C1)[C@]([H])(CO)CC1=CC(OS(O)(=O)=O)=CC=C13431.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Enterodiol sulfate,1TMS,isomer #1C[Si](C)(C)OC[C@H](CC1=CC=CC(O)=C1)[C@H](CO)CC1=CC=CC(OS(=O)(=O)O)=C13320.7Semi standard non polar33892256
Enterodiol sulfate,1TMS,isomer #2C[Si](C)(C)OC1=CC=CC(C[C@@H](CO)[C@H](CO)CC2=CC=CC(OS(=O)(=O)O)=C2)=C13311.4Semi standard non polar33892256
Enterodiol sulfate,1TMS,isomer #3C[Si](C)(C)OC[C@H](CC1=CC=CC(OS(=O)(=O)O)=C1)[C@H](CO)CC1=CC=CC(O)=C13314.9Semi standard non polar33892256
Enterodiol sulfate,1TMS,isomer #4C[Si](C)(C)OS(=O)(=O)OC1=CC=CC(C[C@@H](CO)[C@H](CO)CC2=CC=CC(O)=C2)=C13335.7Semi standard non polar33892256
Enterodiol sulfate,2TMS,isomer #1C[Si](C)(C)OC[C@H](CC1=CC=CC(O[Si](C)(C)C)=C1)[C@H](CO)CC1=CC=CC(OS(=O)(=O)O)=C13206.8Semi standard non polar33892256
Enterodiol sulfate,2TMS,isomer #2C[Si](C)(C)OC[C@H](CC1=CC=CC(O)=C1)[C@H](CO[Si](C)(C)C)CC1=CC=CC(OS(=O)(=O)O)=C13193.7Semi standard non polar33892256
Enterodiol sulfate,2TMS,isomer #3C[Si](C)(C)OC[C@H](CC1=CC=CC(O)=C1)[C@H](CO)CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C13232.4Semi standard non polar33892256
Enterodiol sulfate,2TMS,isomer #4C[Si](C)(C)OC[C@H](CC1=CC=CC(OS(=O)(=O)O)=C1)[C@H](CO)CC1=CC=CC(O[Si](C)(C)C)=C13205.7Semi standard non polar33892256
Enterodiol sulfate,2TMS,isomer #5C[Si](C)(C)OC1=CC=CC(C[C@@H](CO)[C@H](CO)CC2=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C2)=C13271.4Semi standard non polar33892256
Enterodiol sulfate,2TMS,isomer #6C[Si](C)(C)OC[C@H](CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C1)[C@H](CO)CC1=CC=CC(O)=C13227.7Semi standard non polar33892256
Enterodiol sulfate,3TMS,isomer #1C[Si](C)(C)OC[C@H](CC1=CC=CC(O[Si](C)(C)C)=C1)[C@H](CO[Si](C)(C)C)CC1=CC=CC(OS(=O)(=O)O)=C13167.6Semi standard non polar33892256
Enterodiol sulfate,3TMS,isomer #2C[Si](C)(C)OC[C@H](CC1=CC=CC(O[Si](C)(C)C)=C1)[C@H](CO)CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C13195.2Semi standard non polar33892256
Enterodiol sulfate,3TMS,isomer #3C[Si](C)(C)OC[C@H](CC1=CC=CC(O)=C1)[C@H](CO[Si](C)(C)C)CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C13162.8Semi standard non polar33892256
Enterodiol sulfate,3TMS,isomer #4C[Si](C)(C)OC[C@H](CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C1)[C@H](CO)CC1=CC=CC(O[Si](C)(C)C)=C13195.4Semi standard non polar33892256
Enterodiol sulfate,4TMS,isomer #1C[Si](C)(C)OC[C@H](CC1=CC=CC(O[Si](C)(C)C)=C1)[C@H](CO[Si](C)(C)C)CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C13165.7Semi standard non polar33892256
Enterodiol sulfate,4TMS,isomer #1C[Si](C)(C)OC[C@H](CC1=CC=CC(O[Si](C)(C)C)=C1)[C@H](CO[Si](C)(C)C)CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C13286.3Standard non polar33892256
Enterodiol sulfate,4TMS,isomer #1C[Si](C)(C)OC[C@H](CC1=CC=CC(O[Si](C)(C)C)=C1)[C@H](CO[Si](C)(C)C)CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C13754.6Standard polar33892256
Enterodiol sulfate,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(O)=C1)[C@H](CO)CC1=CC=CC(OS(=O)(=O)O)=C13574.5Semi standard non polar33892256
Enterodiol sulfate,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1=CC=CC(C[C@@H](CO)[C@H](CO)CC2=CC=CC(OS(=O)(=O)O)=C2)=C13572.9Semi standard non polar33892256
Enterodiol sulfate,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(OS(=O)(=O)O)=C1)[C@H](CO)CC1=CC=CC(O)=C13568.6Semi standard non polar33892256
Enterodiol sulfate,1TBDMS,isomer #4CC(C)(C)[Si](C)(C)OS(=O)(=O)OC1=CC=CC(C[C@@H](CO)[C@H](CO)CC2=CC=CC(O)=C2)=C13547.3Semi standard non polar33892256
Enterodiol sulfate,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(O[Si](C)(C)C(C)(C)C)=C1)[C@H](CO)CC1=CC=CC(OS(=O)(=O)O)=C13702.8Semi standard non polar33892256
Enterodiol sulfate,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(O)=C1)[C@H](CO[Si](C)(C)C(C)(C)C)CC1=CC=CC(OS(=O)(=O)O)=C13695.7Semi standard non polar33892256
Enterodiol sulfate,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(O)=C1)[C@H](CO)CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C13674.4Semi standard non polar33892256
Enterodiol sulfate,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(OS(=O)(=O)O)=C1)[C@H](CO)CC1=CC=CC(O[Si](C)(C)C(C)(C)C)=C13701.4Semi standard non polar33892256
Enterodiol sulfate,2TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC1=CC=CC(C[C@@H](CO)[C@H](CO)CC2=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C2)=C13744.8Semi standard non polar33892256
Enterodiol sulfate,2TBDMS,isomer #6CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C1)[C@H](CO)CC1=CC=CC(O)=C13671.4Semi standard non polar33892256
Enterodiol sulfate,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(O[Si](C)(C)C(C)(C)C)=C1)[C@H](CO[Si](C)(C)C(C)(C)C)CC1=CC=CC(OS(=O)(=O)O)=C13866.7Semi standard non polar33892256
Enterodiol sulfate,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(O[Si](C)(C)C(C)(C)C)=C1)[C@H](CO)CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C13862.7Semi standard non polar33892256
Enterodiol sulfate,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(O)=C1)[C@H](CO[Si](C)(C)C(C)(C)C)CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C13781.5Semi standard non polar33892256
Enterodiol sulfate,3TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C1)[C@H](CO)CC1=CC=CC(O[Si](C)(C)C(C)(C)C)=C13861.8Semi standard non polar33892256
Enterodiol sulfate,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(O[Si](C)(C)C(C)(C)C)=C1)[C@H](CO[Si](C)(C)C(C)(C)C)CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C14027.1Semi standard non polar33892256
Enterodiol sulfate,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(O[Si](C)(C)C(C)(C)C)=C1)[C@H](CO[Si](C)(C)C(C)(C)C)CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C14197.8Standard non polar33892256
Enterodiol sulfate,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC[C@H](CC1=CC=CC(O[Si](C)(C)C(C)(C)C)=C1)[C@H](CO[Si](C)(C)C(C)(C)C)CC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C13906.0Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Enterodiol sulfate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Enterodiol sulfate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Enterodiol sulfate 10V, Negative-QTOFsplash10-001i-0009000000-0c1906cadd11ae9b34912021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Enterodiol sulfate 20V, Negative-QTOFsplash10-001i-0009000000-13f1c81d9969e4b615232021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Enterodiol sulfate 40V, Negative-QTOFsplash10-05pk-3439000000-45c46caa7103160202752021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Enterodiol sulfate 10V, Positive-QTOFsplash10-001i-0239000000-a84b40896a4ba54ddcac2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Enterodiol sulfate 20V, Positive-QTOFsplash10-052s-2369000000-cbe56e7fe2118c8781eb2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Enterodiol sulfate 40V, Positive-QTOFsplash10-052f-8983000000-a2573098ca14a28c33002021-09-22Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB093694
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound156960882
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available