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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2019-10-07 18:56:55 UTC
Update Date2022-03-07 03:18:16 UTC
HMDB IDHMDB0240440
Secondary Accession NumbersNone
Metabolite Identification
Common Name2-Hydroxyphenylacetic acid glucuronide
Description2-Hydroxyphenylacetic acid glucuronide belongs to the class of organic compounds known as phenol ethers. These are aromatic compounds containing an ether group substituted with a benzene ring. Based on a literature review very few articles have been published on 2-Hydroxyphenylacetic acid glucuronide.
Structure
Thumb
Synonyms
ValueSource
2-Hydroxyphenylacetate glucuronideGenerator
(2S,4S,6S)-6-[2-(Carboxymethyl)phenoxy]-3,4,5-trimethyloxane-2-carboxylateHMDB
Chemical FormulaC17H22O6
Average Molecular Weight322.357
Monoisotopic Molecular Weight322.141638428
IUPAC Name(2S,4S,6S)-6-[2-(carboxymethyl)phenoxy]-3,4,5-trimethyloxane-2-carboxylic acid
Traditional Name(2S,4S,6S)-6-[2-(carboxymethyl)phenoxy]-3,4,5-trimethyloxane-2-carboxylic acid
CAS Registry NumberNot Available
SMILES
[H][C@@]1(OC2=CC=CC=C2CC(O)=O)O[C@]([H])(C(O)=O)C([H])(C)[C@]([H])(C)C1([H])C
InChI Identifier
InChI=1S/C17H22O6/c1-9-10(2)15(16(20)21)23-17(11(9)3)22-13-7-5-4-6-12(13)8-14(18)19/h4-7,9-11,15,17H,8H2,1-3H3,(H,18,19)(H,20,21)/t9-,10?,11?,15-,17+/m0/s1
InChI KeyMLBYCKGONSBJSK-IYJSFKGYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenol ethers. These are aromatic compounds containing an ether group substituted with a benzene ring.
KingdomOrganic compounds
Super ClassBenzenoids
ClassPhenol ethers
Sub ClassNot Available
Direct ParentPhenol ethers
Alternative Parents
Substituents
  • Phenoxy compound
  • Phenol ether
  • Pyran
  • Oxane
  • Dicarboxylic acid or derivatives
  • Monocyclic benzene moiety
  • Oxacycle
  • Organoheterocyclic compound
  • Carboxylic acid
  • Carboxylic acid derivative
  • Acetal
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.57ALOGPS
logP3.18ChemAxon
logS-2.8ALOGPS
pKa (Strongest Acidic)3.48ChemAxon
pKa (Strongest Basic)-4.3ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area93.06 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity81.13 m³·mol⁻¹ChemAxon
Polarizability33.23 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+176.20430932474
DeepCCS[M-H]-173.71230932474
DeepCCS[M-2H]-207.20430932474
DeepCCS[M+Na]+183.52130932474

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.5.99 minutes32390414
Predicted by Siyang on May 30, 202213.0512 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.46 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2164.1 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid284.5 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid161.9 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid169.7 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid109.5 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid535.0 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid557.4 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)76.2 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1034.9 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid507.0 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1362.9 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid304.1 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid407.1 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate259.1 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA227.2 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water70.7 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
2-Hydroxyphenylacetic acid glucuronide[H][C@@]1(OC2=CC=CC=C2CC(O)=O)O[C@]([H])(C(O)=O)C([H])(C)[C@]([H])(C)C1([H])C4135.4Standard polar33892256
2-Hydroxyphenylacetic acid glucuronide[H][C@@]1(OC2=CC=CC=C2CC(O)=O)O[C@]([H])(C(O)=O)C([H])(C)[C@]([H])(C)C1([H])C2393.7Standard non polar33892256
2-Hydroxyphenylacetic acid glucuronide[H][C@@]1(OC2=CC=CC=C2CC(O)=O)O[C@]([H])(C(O)=O)C([H])(C)[C@]([H])(C)C1([H])C2526.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
2-Hydroxyphenylacetic acid glucuronide,1TMS,isomer #1CC1[C@H](OC2=CC=CC=C2CC(=O)O[Si](C)(C)C)O[C@H](C(=O)O)C(C)[C@@H]1C2460.2Semi standard non polar33892256
2-Hydroxyphenylacetic acid glucuronide,1TMS,isomer #2CC1[C@H](OC2=CC=CC=C2CC(=O)O)O[C@H](C(=O)O[Si](C)(C)C)C(C)[C@@H]1C2444.7Semi standard non polar33892256
2-Hydroxyphenylacetic acid glucuronide,2TMS,isomer #1CC1[C@H](OC2=CC=CC=C2CC(=O)O[Si](C)(C)C)O[C@H](C(=O)O[Si](C)(C)C)C(C)[C@@H]1C2436.1Semi standard non polar33892256
2-Hydroxyphenylacetic acid glucuronide,1TBDMS,isomer #1CC1[C@H](OC2=CC=CC=C2CC(=O)O[Si](C)(C)C(C)(C)C)O[C@H](C(=O)O)C(C)[C@@H]1C2699.4Semi standard non polar33892256
2-Hydroxyphenylacetic acid glucuronide,1TBDMS,isomer #2CC1[C@H](OC2=CC=CC=C2CC(=O)O)O[C@H](C(=O)O[Si](C)(C)C(C)(C)C)C(C)[C@@H]1C2699.7Semi standard non polar33892256
2-Hydroxyphenylacetic acid glucuronide,2TBDMS,isomer #1CC1[C@H](OC2=CC=CC=C2CC(=O)O[Si](C)(C)C(C)(C)C)O[C@H](C(=O)O[Si](C)(C)C(C)(C)C)C(C)[C@@H]1C2894.4Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 2-Hydroxyphenylacetic acid glucuronide GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Hydroxyphenylacetic acid glucuronide 10V, Negative-QTOFsplash10-0a6r-0962000000-ec96271024ee99905be92021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Hydroxyphenylacetic acid glucuronide 20V, Negative-QTOFsplash10-0a4i-0920000000-caadb50f32a0527bd4d32021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Hydroxyphenylacetic acid glucuronide 40V, Negative-QTOFsplash10-052f-6910000000-e72e801835443eb8b4062021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Hydroxyphenylacetic acid glucuronide 10V, Positive-QTOFsplash10-0ab9-0977000000-09a490dbf6ff1e2dd1a42021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Hydroxyphenylacetic acid glucuronide 20V, Positive-QTOFsplash10-004i-4941000000-e3a79b60741e9a8498132021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Hydroxyphenylacetic acid glucuronide 40V, Positive-QTOFsplash10-0a4i-6900000000-0887776ac738efc71da02021-09-23Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB093597
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound156960861
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available