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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2019-07-16 18:00:13 UTC
Update Date2022-03-07 03:18:16 UTC
HMDB IDHMDB0240382
Secondary Accession NumbersNone
Metabolite Identification
Common NameProtocatechuic acid 4-O-sulfate
DescriptionProtocatechuic acid 4-O-sulfate, also known as protocatechuate 4-O-sulphate or 3-hydroxy-sulfonyloxybenzoic acid, belongs to the class of organic compounds known as phenylsulfates. Phenylsulfates are compounds containing a sulfuric acid group conjugated to a phenyl group. Based on a literature review very few articles have been published on Protocatechuic acid 4-O-sulfate.
Structure
Data?1563892759
Synonyms
ValueSource
Protocatechuate 4-O-sulfateGenerator
Protocatechuate 4-O-sulphateGenerator
Protocatechuic acid 4-O-sulfuric acidGenerator
Protocatechuic acid 4-O-sulphuric acidGenerator
3-Hydroxy-sulfonyloxybenzoic acidHMDB
3-HSOBHMDB
3-Hydroxy-4-(sulfooxy)benzoic acidHMDB
Protocatechuic acid sulfateHMDB
Protocatechuic acid sulphateHMDB
3,4-DHBA sulfateHMDB
3,4-DHBA sulphateHMDB
Chemical FormulaC7H6O7S
Average Molecular Weight234.18
Monoisotopic Molecular Weight233.983423707
IUPAC Name3-hydroxy-4-(sulfooxy)benzoic acid
Traditional Name3-hydroxy-4-(sulfooxy)benzoic acid
CAS Registry Number76496-12-3
SMILES
OC(=O)C1=CC(O)=C(OS(O)(=O)=O)C=C1
InChI Identifier
InChI=1S/C7H6O7S/c8-5-3-4(7(9)10)1-2-6(5)14-15(11,12)13/h1-3,8H,(H,9,10)(H,11,12,13)
InChI KeyNGQYUDIZIPNWJV-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenylsulfates. Phenylsulfates are compounds containing a sulfuric acid group conjugated to a phenyl group.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassOrganic sulfuric acids and derivatives
Sub ClassArylsulfates
Direct ParentPhenylsulfates
Alternative Parents
Substituents
  • Phenylsulfate
  • Hydroxybenzoic acid
  • Benzoic acid or derivatives
  • Benzoic acid
  • Phenoxy compound
  • Benzoyl
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Monocyclic benzene moiety
  • Benzenoid
  • Sulfuric acid ester
  • Sulfate-ester
  • Sulfuric acid monoester
  • Carboxylic acid derivative
  • Carboxylic acid
  • Monocarboxylic acid or derivatives
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Organic oxide
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-0.74ALOGPS
logP1.2ChemAxon
logS-1.9ALOGPS
pKa (Strongest Acidic)-2.7ChemAxon
pKa (Strongest Basic)-4.5ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area121.13 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity47.27 m³·mol⁻¹ChemAxon
Polarizability19.1 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+150.1930932474
DeepCCS[M-H]-147.79430932474
DeepCCS[M-2H]-180.96630932474
DeepCCS[M+Na]+156.2130932474
AllCCS[M+H]+150.332859911
AllCCS[M+H-H2O]+146.732859911
AllCCS[M+NH4]+153.732859911
AllCCS[M+Na]+154.632859911
AllCCS[M-H]-141.632859911
AllCCS[M+Na-2H]-142.132859911
AllCCS[M+HCOO]-142.732859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.3.71 minutes32390414
Predicted by Siyang on May 30, 202210.7621 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20226.63 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid1087.2 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid329.1 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid81.5 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid195.4 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid83.9 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid351.5 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid447.4 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)158.2 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid738.2 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid273.1 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1197.9 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid229.7 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid255.8 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate679.3 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA209.0 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water324.6 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Protocatechuic acid 4-O-sulfateOC(=O)C1=CC(O)=C(OS(O)(=O)=O)C=C13902.0Standard polar33892256
Protocatechuic acid 4-O-sulfateOC(=O)C1=CC(O)=C(OS(O)(=O)=O)C=C11710.5Standard non polar33892256
Protocatechuic acid 4-O-sulfateOC(=O)C1=CC(O)=C(OS(O)(=O)=O)C=C12014.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Protocatechuic acid 4-O-sulfate,1TMS,isomer #1C[Si](C)(C)OC(=O)C1=CC=C(OS(=O)(=O)O)C(O)=C12092.1Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,1TMS,isomer #2C[Si](C)(C)OC1=CC(C(=O)O)=CC=C1OS(=O)(=O)O2120.8Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,1TMS,isomer #3C[Si](C)(C)OS(=O)(=O)OC1=CC=C(C(=O)O)C=C1O2179.5Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,2TMS,isomer #1C[Si](C)(C)OC(=O)C1=CC=C(OS(=O)(=O)O)C(O[Si](C)(C)C)=C12092.2Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,2TMS,isomer #2C[Si](C)(C)OC(=O)C1=CC=C(OS(=O)(=O)O[Si](C)(C)C)C(O)=C12088.2Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,2TMS,isomer #3C[Si](C)(C)OC1=CC(C(=O)O)=CC=C1OS(=O)(=O)O[Si](C)(C)C2138.6Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,3TMS,isomer #1C[Si](C)(C)OC(=O)C1=CC=C(OS(=O)(=O)O[Si](C)(C)C)C(O[Si](C)(C)C)=C12154.4Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,3TMS,isomer #1C[Si](C)(C)OC(=O)C1=CC=C(OS(=O)(=O)O[Si](C)(C)C)C(O[Si](C)(C)C)=C12321.2Standard non polar33892256
Protocatechuic acid 4-O-sulfate,3TMS,isomer #1C[Si](C)(C)OC(=O)C1=CC=C(OS(=O)(=O)O[Si](C)(C)C)C(O[Si](C)(C)C)=C12667.9Standard polar33892256
Protocatechuic acid 4-O-sulfate,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1=CC=C(OS(=O)(=O)O)C(O)=C12388.5Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1=CC(C(=O)O)=CC=C1OS(=O)(=O)O2413.6Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OS(=O)(=O)OC1=CC=C(C(=O)O)C=C1O2444.9Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1=CC=C(OS(=O)(=O)O)C(O[Si](C)(C)C(C)(C)C)=C12610.6Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)C1=CC=C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)C(O)=C12633.3Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1=CC(C(=O)O)=CC=C1OS(=O)(=O)O[Si](C)(C)C(C)(C)C2645.0Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1=CC=C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=C12830.1Semi standard non polar33892256
Protocatechuic acid 4-O-sulfate,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1=CC=C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=C13100.6Standard non polar33892256
Protocatechuic acid 4-O-sulfate,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1=CC=C(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=C12908.6Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Protocatechuic acid 4-O-sulfate GC-MS (Non-derivatized) - 70eV, Positivesplash10-0uyi-1930000000-deb2d79f265b4d78fef52017-07-27Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Protocatechuic acid 4-O-sulfate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Protocatechuic acid 4-O-sulfate 10V, Positive-QTOFsplash10-001i-0390000000-ccabed7b27f365f5acce2017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Protocatechuic acid 4-O-sulfate 20V, Positive-QTOFsplash10-0a5i-0910000000-db7894fff6e16da697fc2017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Protocatechuic acid 4-O-sulfate 40V, Positive-QTOFsplash10-0udi-9600000000-eca3a36d6ed818fe46782017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Protocatechuic acid 4-O-sulfate 10V, Negative-QTOFsplash10-001i-0490000000-d91ee7d59a18f565a1cc2017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Protocatechuic acid 4-O-sulfate 20V, Negative-QTOFsplash10-0pc9-0910000000-52f458406ef93824b7742017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Protocatechuic acid 4-O-sulfate 40V, Negative-QTOFsplash10-0a4i-2900000000-cd6ebf2a6acafa9bc0322017-06-28Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Protocatechuic acid 4-O-sulfate 10V, Positive-QTOFsplash10-0159-0090000000-70fd210f71ae393269012021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Protocatechuic acid 4-O-sulfate 20V, Positive-QTOFsplash10-0ap0-0930000000-21b7bd3deabbd872dc8d2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Protocatechuic acid 4-O-sulfate 40V, Positive-QTOFsplash10-059j-8900000000-bfc1e338c96f342c20422021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Protocatechuic acid 4-O-sulfate 10V, Negative-QTOFsplash10-001i-0090000000-64544088b0077a7c18b92021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Protocatechuic acid 4-O-sulfate 20V, Negative-QTOFsplash10-000i-0930000000-6970a84c2f09d44c272d2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Protocatechuic acid 4-O-sulfate 40V, Negative-QTOFsplash10-000w-6900000000-bb35c50253bc33d60b5d2021-09-25Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB031321
KNApSAcK IDNot Available
Chemspider ID169832
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Pekkinen J, Rosa-Sibakov N, Micard V, Keski-Rahkonen P, Lehtonen M, Poutanen K, Mykkanen H, Hanhineva K: Amino acid-derived betaines dominate as urinary markers for rye bran intake in mice fed high-fat diet--A nontargeted metabolomics study. Mol Nutr Food Res. 2015 Aug;59(8):1550-62. doi: 10.1002/mnfr.201500066. Epub 2015 May 28. [PubMed:25944556 ]
  2. Koistinen VM (2019). Effects of Food Processing and Gut Microbial Metabolism on Whole Grain Phytochemicals: A Metabolomics Approach. In Publications of the University of Eastern Finland. Dissertations in Health Sciences., no 510 (pp. 26-58). University of Eastern Finland. [ISBN:978-952-61-3088-0 ]