Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2013-06-18 17:42:30 UTC
Update Date2019-07-23 07:14:47 UTC
HMDB IDHMDB0060655
Secondary Accession Numbers
  • HMDB60655
Metabolite Identification
Common Name3-Hydroxylidocaine
Description3-Hydroxylidocaine belongs to the class of organic compounds known as alpha amino acid amides. These are amide derivatives of alpha amino acids. 3-Hydroxylidocaine is a metabolite of lidocaine. Lidocaine is used topically to relieve itching, burning and pain from skin inflammations, injected as a dental anesthetic or as a local anesthetic for minor surgery. 3-Hydroxylidocaine is a very strong basic compound (based on its pKa). 3-hydroxylidocaine can be biosynthesized from lidocaine through the action of the enzymes cytochrome P450 1A2 and cytochrome P450 3A4. In humans, 3-hydroxylidocaine is involved in lidocaine (local anaesthetic) metabolism pathway. Lidocaine, Xylocaine, or lignocaine is a common local anesthetic and antiarrhythmic drug.
Structure
Data?1563866087
SynonymsNot Available
Chemical FormulaC14H22N2O2
Average Molecular Weight250.3367
Monoisotopic Molecular Weight250.168127958
IUPAC Name2-(diethylamino)-N-(3-hydroxy-2,6-dimethylphenyl)acetamide
Traditional Name2-(diethylamino)-N-(3-hydroxy-2,6-dimethylphenyl)acetamide
CAS Registry NumberNot Available
SMILES
CCN(CC)CC(=O)NC1=C(C)C=CC(O)=C1C
InChI Identifier
InChI=1S/C14H22N2O2/c1-5-16(6-2)9-13(18)15-14-10(3)7-8-12(17)11(14)4/h7-8,17H,5-6,9H2,1-4H3,(H,15,18)
InChI KeyPMGUCIDDSCRAMY-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as alpha amino acid amides. These are amide derivatives of alpha amino acids.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentAlpha amino acid amides
Alternative Parents
Substituents
  • Alpha-amino acid amide
  • Xylenol
  • Anilide
  • O-cresol
  • P-cresol
  • M-xylene
  • Xylene
  • N-arylamide
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Monocyclic benzene moiety
  • Benzenoid
  • Carboxamide group
  • Secondary carboxylic acid amide
  • Tertiary amine
  • Tertiary aliphatic amine
  • Organic oxide
  • Organopnictogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organic nitrogen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Amine
  • Organic oxygen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
Process
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility1.3 g/LALOGPS
logP1.69ALOGPS
logP2.54ChemAxon
logS-2.3ALOGPS
pKa (Strongest Acidic)10.04ChemAxon
pKa (Strongest Basic)7.73ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area52.57 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity75.91 m³·mol⁻¹ChemAxon
Polarizability28.69 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+160.86131661259
DarkChem[M-H]-158.97331661259
DeepCCS[M+H]+163.12230932474
DeepCCS[M-H]-160.76430932474
DeepCCS[M-2H]-193.6530932474
DeepCCS[M+Na]+169.21530932474
AllCCS[M+H]+158.432859911
AllCCS[M+H-H2O]+154.932859911
AllCCS[M+NH4]+161.732859911
AllCCS[M+Na]+162.632859911
AllCCS[M-H]-163.532859911
AllCCS[M+Na-2H]-164.032859911
AllCCS[M+HCOO]-164.732859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.2.89 minutes32390414
Predicted by Siyang on May 30, 20229.4658 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20223.45 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid766.6 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid190.4 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid121.6 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid148.2 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid48.1 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid290.0 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid325.3 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)354.7 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid637.5 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid118.6 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid758.6 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid183.3 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid232.6 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate330.8 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA423.2 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water191.9 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3-HydroxylidocaineCCN(CC)CC(=O)NC1=C(C)C=CC(O)=C1C2923.2Standard polar33892256
3-HydroxylidocaineCCN(CC)CC(=O)NC1=C(C)C=CC(O)=C1C2126.2Standard non polar33892256
3-HydroxylidocaineCCN(CC)CC(=O)NC1=C(C)C=CC(O)=C1C2172.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
3-Hydroxylidocaine,1TMS,isomer #1CCN(CC)CC(=O)NC1=C(C)C=CC(O[Si](C)(C)C)=C1C2157.7Semi standard non polar33892256
3-Hydroxylidocaine,1TMS,isomer #2CCN(CC)CC(=O)N(C1=C(C)C=CC(O)=C1C)[Si](C)(C)C1947.4Semi standard non polar33892256
3-Hydroxylidocaine,2TMS,isomer #1CCN(CC)CC(=O)N(C1=C(C)C=CC(O[Si](C)(C)C)=C1C)[Si](C)(C)C1988.2Semi standard non polar33892256
3-Hydroxylidocaine,2TMS,isomer #1CCN(CC)CC(=O)N(C1=C(C)C=CC(O[Si](C)(C)C)=C1C)[Si](C)(C)C2057.7Standard non polar33892256
3-Hydroxylidocaine,2TMS,isomer #1CCN(CC)CC(=O)N(C1=C(C)C=CC(O[Si](C)(C)C)=C1C)[Si](C)(C)C2335.1Standard polar33892256
3-Hydroxylidocaine,1TBDMS,isomer #1CCN(CC)CC(=O)NC1=C(C)C=CC(O[Si](C)(C)C(C)(C)C)=C1C2426.0Semi standard non polar33892256
3-Hydroxylidocaine,1TBDMS,isomer #2CCN(CC)CC(=O)N(C1=C(C)C=CC(O)=C1C)[Si](C)(C)C(C)(C)C2214.5Semi standard non polar33892256
3-Hydroxylidocaine,2TBDMS,isomer #1CCN(CC)CC(=O)N(C1=C(C)C=CC(O[Si](C)(C)C(C)(C)C)=C1C)[Si](C)(C)C(C)(C)C2496.1Semi standard non polar33892256
3-Hydroxylidocaine,2TBDMS,isomer #1CCN(CC)CC(=O)N(C1=C(C)C=CC(O[Si](C)(C)C(C)(C)C)=C1C)[Si](C)(C)C(C)(C)C2446.3Standard non polar33892256
3-Hydroxylidocaine,2TBDMS,isomer #1CCN(CC)CC(=O)N(C1=C(C)C=CC(O[Si](C)(C)C(C)(C)C)=C1C)[Si](C)(C)C(C)(C)C2593.4Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3-Hydroxylidocaine GC-MS (Non-derivatized) - 70eV, Positivesplash10-000i-9610000000-7d9e7465a3e0b86f4e102017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3-Hydroxylidocaine GC-MS (1 TMS) - 70eV, Positivesplash10-0a4r-9241000000-6c2fc67a46d746d33c942017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3-Hydroxylidocaine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3-Hydroxylidocaine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 20V, Positive-QTOFsplash10-000i-9000000000-4041439bd0fd4cf8d7902021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 10V, Positive-QTOFsplash10-0f79-9050000000-fd33f5e9645eebea97b32021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 10V, Positive-QTOFsplash10-0udr-7090000000-e12b82694dc9a32cacc92021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 30V, Positive-QTOFsplash10-000i-9000000000-ed4771fea10716df5db52021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 10V, Positive-QTOFsplash10-0udr-7090000000-8c5bac2e6e0519905c1b2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 0V, Positive-QTOFsplash10-0udi-0090000000-8570de4f92c1821694992021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 30V, Positive-QTOFsplash10-000i-9000000000-bd37225fee133191cf612021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 0V, Positive-QTOFsplash10-0udi-0090000000-ed309985d4bd9c39233e2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 40V, Negative-QTOFsplash10-053i-2900000000-6477f8d10de3ae00fc3e2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 30V, Negative-QTOFsplash10-000i-0900000000-77e96289ee434fe70d612021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 10V, Negative-QTOFsplash10-0002-0290000000-0c7cb9ce98125c219def2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 20V, Negative-QTOFsplash10-000i-0920000000-0852a8bcf3d408b828c32021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 30V, Positive-QTOFsplash10-000i-9000000000-7560cc1a08f730a340c62021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - 3-Hydroxylidocaine 40V, Positive-QTOFsplash10-000i-9000000000-1496edf216edbb2a3e792021-09-20HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxylidocaine 10V, Positive-QTOFsplash10-000i-9010000000-ad5e26b784dac6c93a4c2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxylidocaine 20V, Positive-QTOFsplash10-000i-9000000000-02759b67c995186ef23a2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxylidocaine 40V, Positive-QTOFsplash10-0a4r-9000000000-da6bc9e6cf9a4198ce992017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxylidocaine 10V, Negative-QTOFsplash10-0002-0190000000-cdc94b355bef03bf44652017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxylidocaine 20V, Negative-QTOFsplash10-0072-2980000000-acaf3c5aea41c1d8ec7f2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxylidocaine 40V, Negative-QTOFsplash10-059f-9800000000-ad581d0e4a1f210786892017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxylidocaine 10V, Positive-QTOFsplash10-0udi-1090000000-7dce5a6948f756fcfd542021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxylidocaine 20V, Positive-QTOFsplash10-000i-9610000000-16e94f02639a739b0e392021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxylidocaine 40V, Positive-QTOFsplash10-0a4r-9300000000-cc8630abd8a5e02e98972021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxylidocaine 10V, Negative-QTOFsplash10-000j-0980000000-b9615244ae6ddc09718f2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Hydroxylidocaine 20V, Negative-QTOFsplash10-000i-2900000000-16a846300720890f70632021-10-12Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Membrane (predicted from logP)
Biospecimen Locations
  • Blood
  • Urine
Tissue Locations
  • Kidney
  • Liver
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
UrineExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDC16560
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound161824
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available