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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:45:51 UTC
Update Date2023-02-21 17:21:20 UTC
HMDB IDHMDB0031840
Secondary Accession Numbers
  • HMDB31840
Metabolite Identification
Common Name(S,Z)-Lyratol acetate
Description(S,Z)-Lyratol acetate, also known as (S,Z)-lyratol acetic acid, belongs to the class of organic compounds known as carboxylic acid esters. These are carboxylic acid derivatives in which the carbon atom from the carbonyl group is attached to an alkyl or an aryl moiety through an oxygen atom (forming an ester group). Based on a literature review very few articles have been published on (S,Z)-Lyratol acetate.
Structure
Data?1677000080
Synonyms
ValueSource
(S,Z)-Lyratol acetic acidGenerator
(2E)-4-Ethenyl-2,5-dimethylhexa-2,5-dien-1-yl acetic acidHMDB
(S,e)-Lyratol acetic acidHMDB
Chemical FormulaC12H18O2
Average Molecular Weight194.2701
Monoisotopic Molecular Weight194.13067982
IUPAC Name(2E)-4-ethenyl-2,5-dimethylhexa-2,5-dien-1-yl acetate
Traditional Name(2E)-4-ethenyl-2,5-dimethylhexa-2,5-dien-1-yl acetate
CAS Registry Number79549-21-6
SMILES
CC(=O)OC\C(C)=C\C(C=C)C(C)=C
InChI Identifier
InChI=1S/C12H18O2/c1-6-12(9(2)3)7-10(4)8-14-11(5)13/h6-7,12H,1-2,8H2,3-5H3/b10-7+
InChI KeyMYZPBDIATBBLPX-JXMROGBWSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as carboxylic acid esters. These are carboxylic acid derivatives in which the carbon atom from the carbonyl group is attached to an alkyl or an aryl moiety through an oxygen atom (forming an ester group).
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassCarboxylic acid derivatives
Direct ParentCarboxylic acid esters
Alternative Parents
Substituents
  • Carboxylic acid ester
  • Monocarboxylic acid or derivatives
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.12 g/LALOGPS
logP3.33ALOGPS
logP2.54ChemAxon
logS-3.2ALOGPS
pKa (Strongest Basic)-7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area26.3 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity59.25 m³·mol⁻¹ChemAxon
Polarizability22.57 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+147.96931661259
DarkChem[M-H]-147.16331661259
DeepCCS[M+H]+146.87530932474
DeepCCS[M-H]-144.4830932474
DeepCCS[M-2H]-178.80430932474
DeepCCS[M+Na]+153.43330932474
AllCCS[M+H]+146.132859911
AllCCS[M+H-H2O]+142.432859911
AllCCS[M+NH4]+149.632859911
AllCCS[M+Na]+150.632859911
AllCCS[M-H]-146.332859911
AllCCS[M+Na-2H]-147.532859911
AllCCS[M+HCOO]-148.932859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. 7.14 minutes32390414
Predicted by Siyang on May 30, 202216.5562 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.13 minutes32390414
AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid25.0 seconds40023050
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2406.6 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid524.6 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid194.3 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid309.2 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid95.3 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid569.9 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid810.1 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)94.0 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1421.3 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid520.4 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1419.5 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid442.9 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid406.3 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate404.3 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA449.9 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water8.3 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(S,Z)-Lyratol acetateCC(=O)OC\C(C)=C\C(C=C)C(C)=C1625.7Standard polar33892256
(S,Z)-Lyratol acetateCC(=O)OC\C(C)=C\C(C=C)C(C)=C1291.7Standard non polar33892256
(S,Z)-Lyratol acetateCC(=O)OC\C(C)=C\C(C=C)C(C)=C1292.1Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (S,Z)-Lyratol acetate GC-MS (Non-derivatized) - 70eV, Positivesplash10-000f-9500000000-d91addc72ffd6406011c2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (S,Z)-Lyratol acetate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S,Z)-Lyratol acetate 10V, Positive-QTOFsplash10-000b-2900000000-a86e10ba4010f05fb9522016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S,Z)-Lyratol acetate 20V, Positive-QTOFsplash10-000i-5900000000-5d81ad74f5448f6a93352016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S,Z)-Lyratol acetate 40V, Positive-QTOFsplash10-0006-9600000000-a4c4ba971e6b14ad88bd2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S,Z)-Lyratol acetate 10V, Negative-QTOFsplash10-0006-3900000000-bac3984db202ddc0fd382016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S,Z)-Lyratol acetate 20V, Negative-QTOFsplash10-052f-9700000000-f6a4eaebd6bfe177ea5a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S,Z)-Lyratol acetate 40V, Negative-QTOFsplash10-052f-9300000000-47b990468eb9c9e4658f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S,Z)-Lyratol acetate 10V, Positive-QTOFsplash10-0a4m-7900000000-2703903871ef972ebd502021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S,Z)-Lyratol acetate 20V, Positive-QTOFsplash10-0007-9100000000-581e901e1c9c558acce32021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S,Z)-Lyratol acetate 40V, Positive-QTOFsplash10-0006-9100000000-e27d2edfee281ab530b22021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S,Z)-Lyratol acetate 10V, Negative-QTOFsplash10-053r-2900000000-f739d11ebaccc96a55712021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S,Z)-Lyratol acetate 20V, Negative-QTOFsplash10-05fu-9800000000-7f07ffe7d7101797adf92021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (S,Z)-Lyratol acetate 40V, Negative-QTOFsplash10-0a4m-9100000000-60a35fe6b35b136946902021-09-23Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB008521
KNApSAcK IDNot Available
Chemspider ID4932559
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound6427141
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .