| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2012-09-11 17:30:44 UTC |
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| Update Date | 2022-03-07 02:52:11 UTC |
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| HMDB ID | HMDB0029493 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | Formononetin 7-(6''-malonylglucoside) |
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| Description | Formononetin 7-(6''-malonylglucoside) belongs to the class of organic compounds known as isoflavonoid o-glycosides. These are o-glycosylated derivatives of isoflavonoids, which are natural products derived from 3-phenylchromen-4-one. Formononetin 7-(6''-malonylglucoside) has been detected, but not quantified in, several different foods, such as chickpeas (Cicer arietinum), black tea, herbs and spices, red tea, and teas (Camellia sinensis). This could make formononetin 7-(6''-malonylglucoside) a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Formononetin 7-(6''-malonylglucoside). |
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| Structure | COC1=CC=C(C=C1)C1=COC2=CC(OC3OC(COC(=O)CC(O)=O)C(O)C(O)C3O)=CC=C2C1=O InChI=1S/C25H24O12/c1-33-13-4-2-12(3-5-13)16-10-34-17-8-14(6-7-15(17)21(16)29)36-25-24(32)23(31)22(30)18(37-25)11-35-20(28)9-19(26)27/h2-8,10,18,22-25,30-32H,9,11H2,1H3,(H,26,27) |
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| Synonyms | | Value | Source |
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| Formononetin 7-O-(6''-malonylglucoside) | HMDB | | Formononetin 7-O-glucoside-6''-malonate | HMDB | | 3-oxo-3-[(3,4,5-Trihydroxy-6-{[3-(4-methoxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}oxan-2-yl)methoxy]propanoate | Generator |
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| Chemical Formula | C25H24O12 |
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| Average Molecular Weight | 516.4509 |
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| Monoisotopic Molecular Weight | 516.126776232 |
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| IUPAC Name | 3-oxo-3-[(3,4,5-trihydroxy-6-{[3-(4-methoxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}oxan-2-yl)methoxy]propanoic acid |
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| Traditional Name | 3-oxo-3-[(3,4,5-trihydroxy-6-{[3-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}oxan-2-yl)methoxy]propanoic acid |
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| CAS Registry Number | 34232-16-1 |
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| SMILES | COC1=CC=C(C=C1)C1=COC2=CC(OC3OC(COC(=O)CC(O)=O)C(O)C(O)C3O)=CC=C2C1=O |
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| InChI Identifier | InChI=1S/C25H24O12/c1-33-13-4-2-12(3-5-13)16-10-34-17-8-14(6-7-15(17)21(16)29)36-25-24(32)23(31)22(30)18(37-25)11-35-20(28)9-19(26)27/h2-8,10,18,22-25,30-32H,9,11H2,1H3,(H,26,27) |
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| InChI Key | RDTAGQKYPGLCBK-UHFFFAOYSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as isoflavonoid o-glycosides. These are o-glycosylated derivatives of isoflavonoids, which are natural products derived from 3-phenylchromen-4-one. |
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| Kingdom | Organic compounds |
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| Super Class | Phenylpropanoids and polyketides |
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| Class | Isoflavonoids |
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| Sub Class | Isoflavonoid O-glycosides |
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| Direct Parent | Isoflavonoid O-glycosides |
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| Alternative Parents | |
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| Substituents | - Isoflavonoid o-glycoside
- Isoflavonoid-7-o-glycoside
- 4p-o-methylisoflavone
- Isoflavone
- Phenolic glycoside
- Chromone
- Glycosyl compound
- O-glycosyl compound
- Benzopyran
- 1-benzopyran
- Phenoxy compound
- Anisole
- Methoxybenzene
- Phenol ether
- Alkyl aryl ether
- Pyranone
- Monocyclic benzene moiety
- Dicarboxylic acid or derivatives
- Benzenoid
- 1,3-dicarbonyl compound
- Monosaccharide
- Pyran
- Oxane
- Heteroaromatic compound
- Carboxylic acid ester
- Secondary alcohol
- Polyol
- Organoheterocyclic compound
- Ether
- Acetal
- Oxacycle
- Carboxylic acid
- Carboxylic acid derivative
- Alcohol
- Organic oxide
- Carbonyl group
- Hydrocarbon derivative
- Organooxygen compound
- Organic oxygen compound
- Aromatic heteropolycyclic compound
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| Molecular Framework | Aromatic heteropolycyclic compounds |
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| External Descriptors | Not Available |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Not Available |
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| Role | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022. | 6.29 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 11.8683 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 4.08 minutes | 32390414 | | AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid | 115.9 seconds | 40023050 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 2055.6 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 219.3 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 165.5 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 194.9 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 112.3 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 347.5 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 484.7 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 223.7 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 840.3 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 453.7 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 1273.6 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 320.5 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 304.1 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 346.5 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 204.2 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 134.6 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| Formononetin 7-(6''-malonylglucoside),1TMS,isomer #1 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C)C(O)C(O)C4O)=CC=C3C2=O)C=C1 | 4529.2 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),1TMS,isomer #2 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O[Si](C)(C)C)C(O)C4O)=CC=C3C2=O)C=C1 | 4584.3 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),1TMS,isomer #3 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O)C(O[Si](C)(C)C)C4O)=CC=C3C2=O)C=C1 | 4568.3 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),1TMS,isomer #4 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O)C(O)C4O[Si](C)(C)C)=CC=C3C2=O)C=C1 | 4589.4 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),2TMS,isomer #1 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C4O)=CC=C3C2=O)C=C1 | 4386.1 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),2TMS,isomer #2 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C)C(O)C(O[Si](C)(C)C)C4O)=CC=C3C2=O)C=C1 | 4380.6 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),2TMS,isomer #3 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C)C(O)C(O)C4O[Si](C)(C)C)=CC=C3C2=O)C=C1 | 4378.5 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),2TMS,isomer #4 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C4O)=CC=C3C2=O)C=C1 | 4453.4 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),2TMS,isomer #5 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O[Si](C)(C)C)C(O)C4O[Si](C)(C)C)=CC=C3C2=O)C=C1 | 4479.7 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),2TMS,isomer #6 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O)C(O[Si](C)(C)C)C4O[Si](C)(C)C)=CC=C3C2=O)C=C1 | 4449.4 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),3TMS,isomer #1 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C4O)=CC=C3C2=O)C=C1 | 4303.6 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),3TMS,isomer #2 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C4O[Si](C)(C)C)=CC=C3C2=O)C=C1 | 4325.8 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),3TMS,isomer #3 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C)C(O)C(O[Si](C)(C)C)C4O[Si](C)(C)C)=CC=C3C2=O)C=C1 | 4295.3 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),3TMS,isomer #4 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C4O[Si](C)(C)C)=CC=C3C2=O)C=C1 | 4412.2 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),4TMS,isomer #1 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C4O[Si](C)(C)C)=CC=C3C2=O)C=C1 | 4261.2 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),1TBDMS,isomer #1 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C(C)(C)C)C(O)C(O)C4O)=CC=C3C2=O)C=C1 | 4818.2 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),1TBDMS,isomer #2 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O[Si](C)(C)C(C)(C)C)C(O)C4O)=CC=C3C2=O)C=C1 | 4866.0 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),1TBDMS,isomer #3 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O)C(O[Si](C)(C)C(C)(C)C)C4O)=CC=C3C2=O)C=C1 | 4871.6 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),1TBDMS,isomer #4 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O)C(O)C4O[Si](C)(C)C(C)(C)C)=CC=C3C2=O)C=C1 | 4872.5 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),2TBDMS,isomer #1 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)C4O)=CC=C3C2=O)C=C1 | 4948.2 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),2TBDMS,isomer #2 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C(C)(C)C)C(O)C(O[Si](C)(C)C(C)(C)C)C4O)=CC=C3C2=O)C=C1 | 4933.4 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),2TBDMS,isomer #3 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C(C)(C)C)C(O)C(O)C4O[Si](C)(C)C(C)(C)C)=CC=C3C2=O)C=C1 | 4938.9 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),2TBDMS,isomer #4 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C4O)=CC=C3C2=O)C=C1 | 5001.4 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),2TBDMS,isomer #5 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O[Si](C)(C)C(C)(C)C)C(O)C4O[Si](C)(C)C(C)(C)C)=CC=C3C2=O)C=C1 | 5013.6 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),2TBDMS,isomer #6 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O)C(O[Si](C)(C)C(C)(C)C)C4O[Si](C)(C)C(C)(C)C)=CC=C3C2=O)C=C1 | 4991.1 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),3TBDMS,isomer #1 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C4O)=CC=C3C2=O)C=C1 | 5059.1 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),3TBDMS,isomer #2 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)C4O[Si](C)(C)C(C)(C)C)=CC=C3C2=O)C=C1 | 5093.8 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),3TBDMS,isomer #3 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O[Si](C)(C)C(C)(C)C)C(O)C(O[Si](C)(C)C(C)(C)C)C4O[Si](C)(C)C(C)(C)C)=CC=C3C2=O)C=C1 | 5057.9 | Semi standard non polar | 33892256 | | Formononetin 7-(6''-malonylglucoside),3TBDMS,isomer #4 | COC1=CC=C(C2=COC3=CC(OC4OC(COC(=O)CC(=O)O)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C4O[Si](C)(C)C(C)(C)C)=CC=C3C2=O)C=C1 | 5145.5 | Semi standard non polar | 33892256 |
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| GC-MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted GC-MS | Predicted GC-MS Spectrum - Formononetin 7-(6''-malonylglucoside) GC-MS (Non-derivatized) - 70eV, Positive | splash10-000b-9333500000-c57efcd457e0b204f3b6 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - Formononetin 7-(6''-malonylglucoside) GC-MS (2 TMS) - 70eV, Positive | splash10-0072-9525417000-928614684c91bda5acbd | 2017-10-06 | Wishart Lab | View Spectrum |
MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Experimental LC-MS/MS | LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 6V, Positive-QTOF | splash10-014i-0290030000-d317486b73cac242c290 | 2021-09-20 | HMDB team, MONA | View Spectrum | | Experimental LC-MS/MS | LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 6V, Positive-QTOF | splash10-014i-0090020000-87a0cb1abab493c85f9a | 2021-09-20 | HMDB team, MONA | View Spectrum | | Experimental LC-MS/MS | LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 6V, Positive-QTOF | splash10-014i-0090000000-227e7fe04171a434997f | 2021-09-20 | HMDB team, MONA | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 10V, Positive-QTOF | splash10-014i-2080920000-670dc6d8d89519b8ecf9 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 20V, Positive-QTOF | splash10-014i-1090100000-89a6cbc718c1002f8fbe | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 40V, Positive-QTOF | splash10-014i-2390000000-8b0c4b04a7399e2dfdba | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 10V, Negative-QTOF | splash10-0gc0-9761640000-d64b35fc32fad848d43e | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 20V, Negative-QTOF | splash10-0gb9-7590300000-8ea4a05023f7e65f1380 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 40V, Negative-QTOF | splash10-0159-5490000000-943e37208cd1ae649058 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 10V, Positive-QTOF | splash10-014i-0090120000-23f8d64381714d061d12 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 20V, Positive-QTOF | splash10-014i-0090000000-bfbf6980bd4079612de6 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 40V, Positive-QTOF | splash10-01b9-5595200000-a0fc5cb65e88053f9368 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 10V, Negative-QTOF | splash10-014i-0090300000-0521367064b2d588a166 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 20V, Negative-QTOF | splash10-014i-3091700000-33b09f67dae1da518403 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Formononetin 7-(6''-malonylglucoside) 40V, Negative-QTOF | splash10-014l-4190000000-ba8d7bba7588eaf7b1c5 | 2021-09-24 | Wishart Lab | View Spectrum |
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