| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2012-09-06 15:16:50 UTC |
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| Update Date | 2022-03-07 02:51:42 UTC |
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| HMDB ID | HMDB0014674 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | Chlormerodrin |
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| Description | Chlormerodrin belongs to the class of organic compounds known as isoureas. These are organic compounds containing the isourea group, with the general structure R1N(R2)C(=NR3)OR4, or its hydrocarbyl derivatives (R1,R2,R3,R4=H, alkyl, aryl). Chlormerodrin is an extremely weak basic (essentially neutral) compound (based on its pKa). |
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| Structure | InChI=1S/C5H11N2O2.ClH.Hg/c1-4(9-2)3-7-5(6)8;;/h4H,1,3H2,2H3,(H3,6,7,8);1H;/q;;+1/p-1 |
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| Synonyms | | Value | Source |
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| 1-[3-(Chloromercuri)-2-methoxypropyl]urea | ChEBI | | Chlormerodrina | ChEBI | | Chlormerodrine | ChEBI | | Chlormerodrinum | ChEBI | | {3-[(aminocarbonyl)amino]-2-methoxypropyl}chloromercury | ChEBI |
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| Chemical Formula | C5H11ClHgN2O2 |
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| Average Molecular Weight | 367.2 |
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| Monoisotopic Molecular Weight | 368.021530917 |
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| IUPAC Name | [3-(chloromercurio)-2-methoxypropyl]urea |
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| Traditional Name | chlormerodrin |
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| CAS Registry Number | 62-37-3 |
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| SMILES | COC(CNC(N)=O)C[Hg]Cl |
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| InChI Identifier | InChI=1S/C5H11N2O2.ClH.Hg/c1-4(9-2)3-7-5(6)8;;/h4H,1,3H2,2H3,(H3,6,7,8);1H;/q;;+1/p-1 |
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| InChI Key | BJFGVYCULWBXKF-UHFFFAOYSA-M |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as isoureas. These are organic compounds containing the isourea group, with the general structure R1N(R2)C(=NR3)OR4, or its hydrocarbyl derivatives (R1,R2,R3,R4=H, alkyl, aryl). |
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| Kingdom | Organic compounds |
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| Super Class | Organic acids and derivatives |
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| Class | Carboximidic acids and derivatives |
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| Sub Class | Carboximidic acids |
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| Direct Parent | Isoureas |
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| Alternative Parents | |
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| Substituents | - Isourea
- Dialkyl ether
- Ether
- Organic metal halide
- Carboximidamide
- Organic transition metal salt
- Organic nitrogen compound
- Hydrocarbon derivative
- Hydrochloride
- Organic salt
- Organic zwitterion
- Organic oxide
- Organooxygen compound
- Organonitrogen compound
- Organopnictogen compound
- Imine
- Organic oxygen compound
- Aliphatic acyclic compound
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| Molecular Framework | Aliphatic acyclic compounds |
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| External Descriptors | |
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| Ontology |
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| Not Available | Not Available |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | 152.5 °C | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | 29.2 g/L | Not Available | | LogP | -0.80 | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid | 278.0 seconds | 40023050 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 462.8 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 278.6 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 69.2 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 174.6 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 47.4 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 266.4 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 239.7 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 724.9 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 580.3 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 39.0 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 695.5 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 180.0 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 194.8 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 653.1 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 478.2 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 256.4 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| Chlormerodrin,1TMS,isomer #1 | COC(CNC(=O)N[Si](C)(C)C)C[Hg]Cl | 1642.0 | Semi standard non polar | 33892256 | | Chlormerodrin,1TMS,isomer #1 | COC(CNC(=O)N[Si](C)(C)C)C[Hg]Cl | 1360.9 | Standard non polar | 33892256 | | Chlormerodrin,1TMS,isomer #1 | COC(CNC(=O)N[Si](C)(C)C)C[Hg]Cl | 2416.1 | Standard polar | 33892256 | | Chlormerodrin,1TMS,isomer #2 | COC(C[Hg]Cl)CN(C(N)=O)[Si](C)(C)C | 1606.5 | Semi standard non polar | 33892256 | | Chlormerodrin,1TMS,isomer #2 | COC(C[Hg]Cl)CN(C(N)=O)[Si](C)(C)C | 1445.3 | Standard non polar | 33892256 | | Chlormerodrin,1TMS,isomer #2 | COC(C[Hg]Cl)CN(C(N)=O)[Si](C)(C)C | 2566.0 | Standard polar | 33892256 | | Chlormerodrin,2TMS,isomer #1 | COC(C[Hg]Cl)CN(C(=O)N[Si](C)(C)C)[Si](C)(C)C | 1655.7 | Semi standard non polar | 33892256 | | Chlormerodrin,2TMS,isomer #1 | COC(C[Hg]Cl)CN(C(=O)N[Si](C)(C)C)[Si](C)(C)C | 1530.0 | Standard non polar | 33892256 | | Chlormerodrin,2TMS,isomer #1 | COC(C[Hg]Cl)CN(C(=O)N[Si](C)(C)C)[Si](C)(C)C | 2054.8 | Standard polar | 33892256 | | Chlormerodrin,2TMS,isomer #2 | COC(CNC(=O)N([Si](C)(C)C)[Si](C)(C)C)C[Hg]Cl | 1686.0 | Semi standard non polar | 33892256 | | Chlormerodrin,2TMS,isomer #2 | COC(CNC(=O)N([Si](C)(C)C)[Si](C)(C)C)C[Hg]Cl | 1575.1 | Standard non polar | 33892256 | | Chlormerodrin,2TMS,isomer #2 | COC(CNC(=O)N([Si](C)(C)C)[Si](C)(C)C)C[Hg]Cl | 2168.4 | Standard polar | 33892256 | | Chlormerodrin,3TMS,isomer #1 | COC(C[Hg]Cl)CN(C(=O)N([Si](C)(C)C)[Si](C)(C)C)[Si](C)(C)C | 1726.4 | Semi standard non polar | 33892256 | | Chlormerodrin,3TMS,isomer #1 | COC(C[Hg]Cl)CN(C(=O)N([Si](C)(C)C)[Si](C)(C)C)[Si](C)(C)C | 1708.9 | Standard non polar | 33892256 | | Chlormerodrin,3TMS,isomer #1 | COC(C[Hg]Cl)CN(C(=O)N([Si](C)(C)C)[Si](C)(C)C)[Si](C)(C)C | 1842.4 | Standard polar | 33892256 | | Chlormerodrin,1TBDMS,isomer #1 | COC(CNC(=O)N[Si](C)(C)C(C)(C)C)C[Hg]Cl | 1894.6 | Semi standard non polar | 33892256 | | Chlormerodrin,1TBDMS,isomer #1 | COC(CNC(=O)N[Si](C)(C)C(C)(C)C)C[Hg]Cl | 1626.3 | Standard non polar | 33892256 | | Chlormerodrin,1TBDMS,isomer #1 | COC(CNC(=O)N[Si](C)(C)C(C)(C)C)C[Hg]Cl | 2392.8 | Standard polar | 33892256 | | Chlormerodrin,1TBDMS,isomer #2 | COC(C[Hg]Cl)CN(C(N)=O)[Si](C)(C)C(C)(C)C | 1840.0 | Semi standard non polar | 33892256 | | Chlormerodrin,1TBDMS,isomer #2 | COC(C[Hg]Cl)CN(C(N)=O)[Si](C)(C)C(C)(C)C | 1686.5 | Standard non polar | 33892256 | | Chlormerodrin,1TBDMS,isomer #2 | COC(C[Hg]Cl)CN(C(N)=O)[Si](C)(C)C(C)(C)C | 2608.1 | Standard polar | 33892256 | | Chlormerodrin,2TBDMS,isomer #1 | COC(C[Hg]Cl)CN(C(=O)N[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2087.5 | Semi standard non polar | 33892256 | | Chlormerodrin,2TBDMS,isomer #1 | COC(C[Hg]Cl)CN(C(=O)N[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 1968.6 | Standard non polar | 33892256 | | Chlormerodrin,2TBDMS,isomer #1 | COC(C[Hg]Cl)CN(C(=O)N[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2212.2 | Standard polar | 33892256 | | Chlormerodrin,2TBDMS,isomer #2 | COC(CNC(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C[Hg]Cl | 2119.7 | Semi standard non polar | 33892256 | | Chlormerodrin,2TBDMS,isomer #2 | COC(CNC(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C[Hg]Cl | 2011.4 | Standard non polar | 33892256 | | Chlormerodrin,2TBDMS,isomer #2 | COC(CNC(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C[Hg]Cl | 2236.1 | Standard polar | 33892256 | | Chlormerodrin,3TBDMS,isomer #1 | COC(C[Hg]Cl)CN(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2376.1 | Semi standard non polar | 33892256 | | Chlormerodrin,3TBDMS,isomer #1 | COC(C[Hg]Cl)CN(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2301.0 | Standard non polar | 33892256 | | Chlormerodrin,3TBDMS,isomer #1 | COC(C[Hg]Cl)CN(C(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 2190.0 | Standard polar | 33892256 |
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| GC-MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted GC-MS | Predicted GC-MS Spectrum - Chlormerodrin GC-MS (Non-derivatized) - 70eV, Positive | splash10-006x-9130000000-575397e51147bf32fe4f | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - Chlormerodrin GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlormerodrin 10V, Positive-QTOF | splash10-014i-0009000000-5828671eb72e66d292e8 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlormerodrin 20V, Positive-QTOF | splash10-004l-1039000000-289126660e95eea52e0d | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlormerodrin 40V, Positive-QTOF | splash10-01vo-5091000000-346f98c0ee5cc7374f06 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlormerodrin 10V, Negative-QTOF | splash10-0600-4009000000-3b5d0fafc96d66cfd915 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlormerodrin 20V, Negative-QTOF | splash10-0a4i-9013000000-986701e03905558d278a | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlormerodrin 40V, Negative-QTOF | splash10-0006-9000000000-72278ece7c95229099e1 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlormerodrin 10V, Negative-QTOF | splash10-014i-2109000000-faa16a53dac843cf55fb | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlormerodrin 20V, Negative-QTOF | splash10-0a6s-9303000000-6e9e5b1dab83be16bd12 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlormerodrin 40V, Negative-QTOF | splash10-0a4l-9113000000-321e45cc579e068e1377 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlormerodrin 10V, Positive-QTOF | splash10-014i-0009000000-51f044ba0bcc2ee0d2dc | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlormerodrin 20V, Positive-QTOF | splash10-06fu-3029000000-aaa08641b929903772d0 | 2021-09-24 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Chlormerodrin 40V, Positive-QTOF | splash10-0udi-9041000000-b4830693bd294c6916c1 | 2021-09-24 | Wishart Lab | View Spectrum |
NMR Spectra| Spectrum Type | Description | Deposition Date | Source | View |
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| Predicted 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted 1D NMR | 13C NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-25 | Wishart Lab | View Spectrum |
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